Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2599 ATGTTGTTGTTGTTTGAGATGGAGAATTATGAAGAAGGTGATTTGACTGATATTGTGAGAGGAGGAAGATCAAGATCAAGATCAACAACAAGAAGCTCCACTTCTCATTGCAAAACGGAATTGGGTGATCAAGATGAAGATCAAGATTCTCCCTTTTATTCTTCATCACAAGATAACAATTACAATCCTCAGTGGAGTAGCTCCCAATTTTCATCACAACTACTACTACAAGATCATCATCAATACAGTTTTGGGGATCCATTTTGTAGTACTGTTGCTGCTTCACTTGATCTTCATCGAGAGCTGGATAATACTAATAATAATACTTTTTTCAATGGAATTACTACTACTACTACTACTTCTACTCAAGATGAGCTTATCAAAACGCCTTCTTCTTCCAATATTTTCTCACGTATGCTTCAGATCTCTCCTTCACCCGACAAATTCCCAACCATTTCTTCACTTAATTCCTCTTCTAATTTCCTAATTCCCAATCATTCTCTTAACTCTCCCACCACTCCACATTCTGATCACCTTCATCATTTTCTTCATCATAATGATAATAATCCCTCCCCCTCCGCCCTTCACATCTCTTCTCCTCGCAATCCACCCGGTATCAAGCGAAGGAAGAGCCAAGCAAGGAAAGTGGTTTGTGTTCCAGCTCCAGTGGCTGCTAGTAGTAGACCAAATGGGGAAGTTATTCCTTCTGATCTGTGGGCTTGGAGGAAATATGGTCAGAAACCCATTAAAGGCTCTCCATATCCTAGGGGGTATTATAGATGCAGCAGCTCAAAGGGATGCTCAGCAAGAAAACAAGTGGAGAGAAGTAGAACAGATCCAAACATGCTGGTGATTACTTACACATCTGAGCATAACCATCCATGGCCAACTCAAAGAAATGCTCTTGCTGGTTCTTCAAGGTCCCAACAATCTAAAAACAACAACATTACTACTACTACTTCTTCAACTTCAACAACAACACCAACACCCAATTCTTCAAAACTCTCTCAAGATCATCATCACAAAAATAAGGAAGAAAAAGAAGAGCATCAAGATCAAAACAATGGAACATTATTATCAGCTGCAGCAACAACAACATCAAATAACAATAATAATGTTAAGGAAGAGGAAATTGAGAACCATCATCATCAATCGATGATGAGTGAAGGGTTTGATGATGATCATGATTTCTTTGCAGATTTGGAAGAATTACAAACAGACCCTTTAACTCTGTTGTTCACTACACAACAACCCCTTAAATTAGACCAAATCAAAGAATCAGCCACCACCACCCCGACTACTACTACAGGTTGCTTACACGACGTCGTTCCATTCAATAATCTCTTTGATTGGCCACCACCTCCTCTAAACAACAATTCAACTCCATTTCATGAACAACCACCACCTACTACTCCTACCAACAGAGGTTTTTATTAA 1437 39.25 MLLLFEMENYEEGDLTDIVRGGRSRSRSTTRSSTSHCKTELGDQDEDQDSPFYSSSQDNNYNPQWSSSQFSSQLLLQDHHQYSFGDPFCSTVAASLDLHRELDNTNNNTFFNGITTTTTTSTQDELIKTPSSSNIFSRMLQISPSPDKFPTISSLNSSSNFLIPNHSLNSPTTPHSDHLHHFLHHNDNNPSPSALHISSPRNPPGIKRRKSQARKVVCVPAPVAASSRPNGEVIPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQQSKNNNITTTTSSTSTTTPTPNSSKLSQDHHHKNKEEKEEHQDQNNGTLLSAAATTTSNNNNNVKEEEIENHHHQSMMSEGFDDDHDFFADLEELQTDPLTLLFTTQQPLKLDQIKESATTTPTTTTGCLHDVVPFNNLFDWPPPPLNNNSTPFHEQPPPTTPTNRGFY 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 37512448 37515550 - CaPI482276_01g025990.1 Cam01g2599 119681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2599 478 MobiDBLite consensus disorder prediction 20 59 - -
Cam01g2599 478 MobiDBLite consensus disorder prediction 172 213 - -
Cam01g2599 478 Pfam WRKY DNA -binding domain 237 294 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g2599 478 MobiDBLite consensus disorder prediction 279 334 - -
Cam01g2599 478 SMART WRKY_cls 235 295 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g2599 478 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g2599 478 MobiDBLite consensus disorder prediction 335 353 - -
Cam01g2599 478 Gene3D WRKY domain 209 289 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g2599 478 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 406 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam01g2599 478 MobiDBLite consensus disorder prediction 456 478 - -
Cam01g2599 478 FunFam probable WRKY transcription factor 14 209 289 - -
Cam01g2599 478 MobiDBLite consensus disorder prediction 22 37 - -
Cam01g2599 478 SUPERFAMILY WRKY DNA-binding domain 234 296 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g2599 478 MobiDBLite consensus disorder prediction 252 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0090 Cam-Chr1:1181597 Cam01g2599 Cam-Chr1:37512448 1.70E-32 dispersed
Cam01g2599 Cam-Chr1:37512448 Cam05g0153 Cam-Chr5:1694607 1.30E-38 dispersed
Cam10g1124 Cam-Chr10:24329911 Cam01g2599 Cam-Chr1:37512448 7.40E-26 transposed
Cam01g2599 Cam-Chr1:37512448 Cam03g0871 Cam-Chr3:10708151 2.10E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51390 PF03106 WRKY 2.70E-25 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2599 - - - 0.0