Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0026 ATGGGGAAAGGACCGTTTTCTTTCCGCCGGAGCAGTAGTCGCCGCCGCCCTAAGAAGGCGTTTCATTCGTCACCGTCCTCGTCGCCACAGCCACCTCCGCAGATTAGCACCAGTTCTCCTCCCATTAACAATAATGGGAATGGCTTGGTTGGTGGTGGGGGTGGTGGGGTTGTGGGAAAAGTGAAGAAGAAGGCCGGAGGACCTAGGCTGTGGATGCGTCTCGACAGGTGGGGGCAATCGGAGCTTTTAGAGTGGGACAAGAATGCTATAATCCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACACTCATCTAGCATACTCGCCAGGGAAAAGGCCATGGTTGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTATTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTAGATCAGCTAAGGAAGCTACTTGCTAAGACGGGTTCATCTCAACTTGAAAATGATGGGAATGTTTCGAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGAGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCTTTGGAGGTTGTGTGCATGTACTTGGATTCCAGTGTGGCAGACCTTGAGAGAGACGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGTTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAGAAGGTGCGGGATGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAATTTGATACTTTGCCGGGAGGTGTGGCTTCCAACAGCACGACTACTATCGTTCCTCATCTTCGTCGACTTAGTTCCACCAGGAGTGGCAGTGTGGTGACCAGCAACCTTTTGGATGATAATGACGTAGAGGACTTGGAGATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGATGACACCGAGGATTATGTTAATATTCAACTTGACAACCAAAGAAATGAACTCATTCAGTTTCAGTTAACCCTGACAATTGCTTCATTTGCCATAGCTGTTGAAACCTTAATCGCCGGATTGTTTGGTATGAACATCCCTTGTACATTGTACGAGACGGACGGGGTGTTCGGGTACTTTGTCGGAGGTTCTTCAGCAGGATGTTTGTTGCTTTTCCTGCTTATTTTTGGGTATGCAAAATGGAAGAAGCTTCTTGGTTCATGA 1329 46.28 MGKGPFSFRRSSSRRRPKKAFHSSPSSSPQPPPQISTSSPPINNNGNGLVGGGGGGVVGKVKKKAGGPRLWMRLDRWGQSELLEWDKNAIIRRAAIPARDLRILGPVFSHSSSILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKTGSSQLENDGNVSRGGKWLPVSEAAEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQFDTLPGGVASNSTTTIVPHLRRLSSTRSGSVVTSNLLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYETDGVFGYFVGGSSAGCLLLFLLIFGYAKWKKLLGS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1404830 1409818 - CaPI482276_02g000260.1 Cam02g0026 119768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0026 442 Gene3D Magnesium transport protein CorA, transmembrane region 145 373 - -
Cam02g0026 442 Gene3D - 60 142 - -
Cam02g0026 442 MobiDBLite consensus disorder prediction 1 58 - -
Cam02g0026 442 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 378 429 IPR045863 -
Cam02g0026 442 FunFam Magnesium transporter MRS2-1 59 142 - -
Cam02g0026 442 Pfam Magnesium transporter MRS2-like 84 286 - -
Cam02g0026 442 Gene3D Magnesium transport protein CorA, transmembrane region 380 440 - -
Cam02g0026 442 Pfam CorA-like Mg2+ transporter protein 332 433 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cam02g0026 442 CDD Mrs2_Mfm1p-like 71 439 IPR039204 -
Cam02g0026 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 58 439 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cam02g0026 442 Coils Coil 240 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0026 Cam-Chr2:1404830 Cam05g1114 Cam-Chr5:10262101 4.40E-214 dispersed
Cam02g0026 Cam-Chr2:1404830 Cam07g0060 Cam-Chr7:1741241 1.10E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0026 K16075 - csv:101203496 732.25