Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0063 ATGCTCCCCAGAAAACCCCCATTCCCTTTCTCCATTTCCAAATCCACTCTCCTTTTCCTCTCCATGGCTTCCCTCTCCTTCCTCTCTTTCCTCTCCCTCTTCTTCTTCTTCCTCTCTCTCTCCTCCTCCTCCTCCGCCGCTCGCCATCGCCACCACCACCTCCCAACCCATTTCACCAACCCCCCTTCCACAGACGACGTCATCCTTCACGCCTGCAAGGCCACCCGTTTTCCCGATCAATGCGGATCTTCCCTCTCTCACTCCTCCTCTCTCCCTCCCAATCCTACCCCTCTCCAGATCCTCCAATCCGCCGTCGCCCTCTCATCCGACGGTTTAGCCACTGCTCAATCCATGGTTAACCAGATTCTCGATTCCTCCGCCAAGAATCTCAATCGGACCACCGCTGCCAAGAACTGCCTTGAGGTACTGCGGAATTCCGATTACCGTATTTCTCTCACCAACGACGCTCTCCGCCGTGGTCGGACCAAGGACGCCCGCGCCTGGCTGAGTGCGTCCCTACTTTACCATTATGATTGCTGGTCTGCGCTCAAGTACGCCAACGACACTCAATTGGTTGACAAAACCATGGCGTTTCTCGATTCTCTTATTGGTCTCTCCAGCAACGCGCTGAGTATGTTGGTGGCTTACGACATTTCCGGCAACGATACGGCGGCGTGGACGCCGCCGAGGACGGAGCGGGATGGGTTTTGGGAAGGCGGTGGCGGCGGATCTGGGTTGGGGTTTAGCGGTGGGTTTCCGTCGAAGGTGGCGGCTGATGCGACGGTGTGCAAGGATGGCGCTGGGGGATGTTATAAAACTGTTCAGGAAGCTGTTAACGCGGCGCCGGAGAATGCGGCGGCGCGTAGGTTTGTGATTCATATTAAGGAAGGTGTTTATGAGGAAATCGTGAGGGTTCCGTTAGAGAAGAAGAATGTGGTGTTTTTAGGAGATGGGATGGGCAAAACGGTCATTACGGGCTCACTTAATGTGGGCCAGCCTGGGATTTCCACTTACAACACCGCCACCGTTGGAGTACTTGGTGATGGATTCATGGCTAGCGGTCTCACCATTCAAAACACAGCAGGGCCAGATGCTCATCAAGCTGTGGCTTTTAGATCAGACAGTGATCTCTCAGTCATTCAAGACTGTGAGTTTCTAGGCAATCAAGACACTCTCTATGCTCACTCCCTTCGCCAATTCTACAAATCTTGTAAGATTCAAGGCAATGTAGATTTCATCTTTGGAAACTCAGCTTCCATCTTCCAAGACTGCGAGATCCTAGTTCGCCCTAGACAGCTCAAGCCTGAGAAAGGTGAAAACAACGCCATCACTGCTCAGGGCAGGACCGACCCTGCTCAAGCGACAGGGTTCGTATTCCAAAACTGCCTCATAAATGGCACTCAGGAGTACATGTCATTGTACTACAGCAAGCCTAAAGTGCATAAAAACTACTTGGGGAGACCGTGGAAGGAGTACTCGAGGACAGTTTTTATACATTGTACTCTCGAGGCTCTTGTCACACCTGCGGGGTGGATGCCATGGAGTGGGGATTTTGCATTGAAGACTCTTTTCTATGGAGAGTTTGAGAATTCGGGAGCGGGGTCGAAGACATCGGAGAGAGTCGGGTGGAGTAGTCAGATTCCAGCACAACATGTTTTTAGTTACTCTGTTCAAAATTTCATTCAGGGAGACGAATGGATTCCTTCATCTCAGTCATCTAATGAACCAAAAATGTTGAACAGGAAAAGTAAAGATGTGAAATTAGATTAG 1770 51.3 MLPRKPPFPFSISKSTLLFLSMASLSFLSFLSLFFFFLSLSSSSSAARHRHHHLPTHFTNPPSTDDVILHACKATRFPDQCGSSLSHSSSLPPNPTPLQILQSAVALSSDGLATAQSMVNQILDSSAKNLNRTTAAKNCLEVLRNSDYRISLTNDALRRGRTKDARAWLSASLLYHYDCWSALKYANDTQLVDKTMAFLDSLIGLSSNALSMLVAYDISGNDTAAWTPPRTERDGFWEGGGGGSGLGFSGGFPSKVAADATVCKDGAGGCYKTVQEAVNAAPENAAARRFVIHIKEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGISTYNTATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSVIQDCEFLGNQDTLYAHSLRQFYKSCKIQGNVDFIFGNSASIFQDCEILVRPRQLKPEKGENNAITAQGRTDPAQATGFVFQNCLINGTQEYMSLYYSKPKVHKNYLGRPWKEYSRTVFIHCTLEALVTPAGWMPWSGDFALKTLFYGEFENSGAGSKTSERVGWSSQIPAQHVFSYSVQNFIQGDEWIPSSQSSNEPKMLNRKSKDVKLD 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1739963 1742541 + CaPI482276_02g000630.1 Cam02g0063 119805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0063 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 212 IPR035513 -
Cam02g0063 589 MobiDBLite consensus disorder prediction 567 589 - -
Cam02g0063 589 NCBIfam pectinesterase inhibitor domain 31 212 IPR006501 GO:0004857(InterPro)
Cam02g0063 589 Gene3D - 253 576 IPR012334 -
Cam02g0063 589 FunFam Pectinesterase 253 578 - -
Cam02g0063 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 215 IPR035513 -
Cam02g0063 589 SUPERFAMILY Pectin lyase-like 256 569 IPR011050 -
Cam02g0063 589 SMART PMEI_2 63 212 IPR006501 GO:0004857(InterPro)
Cam02g0063 589 Pfam Pectinesterase 259 564 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cam02g0063 589 PANTHER PECTINESTERASE 30 569 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cam02g0063 589 FunFam Probable pectinesterase/pectinesterase inhibitor 51 66 215 - -
Cam02g0063 589 Pfam Plant invertase/pectin methylesterase inhibitor 68 212 IPR006501 GO:0004857(InterPro)
Cam02g0063 589 CDD PMEI-like_3 71 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0063 Cam-Chr2:1739963 Cam05g0874 Cam-Chr5:7890130 1.60E-83 dispersed
Cam02g0062 Cam-Chr2:1734524 Cam02g0063 Cam-Chr2:1739963 6.00E-210 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0063 - - - 0.0