Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0079 ATGAAATATATGAAGATCATGGATGAGAATAAAAGACCTTTCATGGCTGTGATTCTGATTCAAACCATTTACGCCGGCATGTTTCTCCTCTCCAAGGCTGCGTTCGATGGCGGAATGAACAACTATATCTTCGTTTTCTATCGCCAAGCCATCGCCACCGTCTTCCTTTCTCCCATAGCCTTCTTTTTCCAATGGAAAGATGCCCCACCTTTGACATTCTTCACCTTCTGCAAAATTTTTATGCTCTCTTTATTTGGGATAGCCATATGTTTAAATCTTTATGGGATTGCTCTTGTGTACACGTCAGCAACATTGGCTGCAGCAACTACAAATTGTCTTCCTGTCATCACCTTCTTCGTCGCTCTCTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGCTAGCAGGAATAATATTGTGCATTGGTGGTGTTGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAATTTGTTTAATAATCATCATCTCTTTTCTATCCATCACCATTCTTCTAATTCTCTTGCATTGCCCAAATCTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATATTAGGCTTCTTTCAGTTGCATACTGTGGTATCGTGGTAACCGCGGTTACATATTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATTTAGCCATGTCTACACCTTTTGCCCTTATCATTACAACCTTCTTCTCTGCTGTTTTTCTTGGGGAGAGTATCGCTCTTAGAAGTACTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTAGTAAAGAATGCAACATGCAAGGGAATGAGATCACTAAGTTAGGAAATGAAACTCCAACTTCTTCAGTGGAAAATGTCTGA 1107 39.48 MKYMKIMDENKRPFMAVILIQTIYAGMFLLSKAAFDGGMNNYIFVFYRQAIATVFLSPIAFFFQWKDAPPLTFFTFCKIFMLSLFGIAICLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRMEVLRMKSIAGIAKLAGIILCIGGVGMLAFYKGPQFNLFNNHHLFSIHHHSSNSLALPKSWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNIRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPFALIITTFFSAVFLGESIALRSTLGGMLLVGGLYFVLWGKSKEQKISEGLKEGSKECNMQGNEITKLGNETPTSSVENV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1893873 1901624 - CaPI482276_02g000790.1 Cam02g0079 119821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0079 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
Cam02g0079 368 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
Cam02g0079 368 Pfam EamA-like transporter family 16 144 IPR000620 GO:0016020(InterPro)
Cam02g0079 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Cam02g0079 368 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1607 Cam-Chr1:29637568 Cam02g0079 Cam-Chr2:1893873 5.10E-88 dispersed
Cam01g1609 Cam-Chr1:29659607 Cam02g0079 Cam-Chr2:1893873 2.60E-87 dispersed
Cam02g0079 Cam-Chr2:1893873 Cam08g1139 Cam-Chr8:17730145 9.60E-82 dispersed
Cam02g0078 Cam-Chr2:1882613 Cam02g0079 Cam-Chr2:1893873 1.50E-122 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0079 - - - 0.0