Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0082 ATGGTGAAATCCCCAGAAAATGAACATCCTCACAAGGCTTTTGGTTGGGCTGCTCGAGATTCTTCTGGCTTACTCTCCCCTTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTGTCTATCAAAGTCCTTTACTGTGGGGTCTGCCACTCTGATCTGCACATGCTCAAGAATGACTGGGGTTCTACAGATTATCCTGTAGTACCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTTAAAGCAGGAGACGAAGTTGGGGTCGGTGTCATAGTTGGATCTTGTAGAAATTGTGAAAACTGCAAACAAGACTTGGAGAGTTACTGCTCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACGAAGAATTACGGTGGTTATTCGGATAAGATCGTTGTCGATCAGCATTTTGTTGTGAGATTTCCTAAAAACTTAGCTCTTGATGCTGGTGCTCCACTCCTATGTGCTGGCATTACAGTTTATAGCCCAATGAGACATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGATTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATCGACAGGCTCGGTGCGGATGCTTTCGTTGTTTCAAGTGATCCCGAACAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATCCTCTTGATCCGTTGATTAGTCTGCTAAACCTCAATGGAAAATTAGTCGCTGTTGGTTTACCTAACAAGCCACTTGAACTATCGCTCGGGTGTCTTGTTTCTGGTAGGAGGCTGGTTGCTGGAAGCAACTTTGGAGGATTGAAAGAGACGCAAGAGATGTTAGATTTCTGTGGAAAACACAATATTACAGCAGAAATTGAGCTCATTAAGATGGATGCCATTAATTCGGCTATCGAAAGGCTTGGGAAAGCTGATGTTAAATATCGGTTTGTGATCGACATCGGAAACTCTTTCAAATAG 1077 42.8 MVKSPENEHPHKAFGWAARDSSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPVVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCKQDLESYCSKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMRHFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAIDRLGADAFVVSSDPEQLKAAMGTMDYILDTISAVHPLDPLISLLNLNGKLVAVGLPNKPLELSLGCLVSGRRLVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMDAINSAIERLGKADVKYRFVIDIGNSFK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1939945 1943545 + CaPI482276_02g000820.1 Cam02g0082 119824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0082 358 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cam02g0082 358 FunFam probable cinnamyl alcohol dehydrogenase 16 174 - -
Cam02g0082 358 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Cam02g0082 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
Cam02g0082 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cam02g0082 358 Gene3D - 16 353 - -
Cam02g0082 358 Gene3D - 167 323 - -
Cam02g0082 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 321 IPR036291 -
Cam02g0082 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cam02g0082 358 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
Cam02g0082 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cam02g0082 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0082 Cam-Chr2:1939945 Cam05g1718 Cam-Chr5:25667786 7.30E-119 dispersed
Cam02g0082 Cam-Chr2:1939945 Cam02g0083 Cam-Chr2:1952535 2.80E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0082 K00083 - csv:101205228 670.233