Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0083 ATGGCAAAATCACCAGAAGATGAACACCCAATCAAGGCTTTCGGATGGGCTGCCCGAGATACATCCGGGTTACTCTCCCCCTTCCATTTCTCTAGAAGGGAAAATCGTGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTACATTTGCTCAAGAATGATTGGGGTGTCACAAATTATCCAATTGTCCCAGGGCATGAGATTGTCGGTGTTGTGACCTCTGTTGGAAAGAATGTGAAGAAATTCAAAGCAGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAGAAGTTGTGAAAATTGTGAACAAGACTTGGAGAATTACTGCCCCAAGATGACATATACTTACAACTCACATTCATCTGATGGAGAAAAGACTTATGGTGGTTATTCTGATAAGATCGTTGTTGATCAGCATTTCGTTCTCCGATTTCCTGACAACTTACCCCTTGATGCTGGAGCTCCACTTCTTTGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTCCAAGAAAGAAGGAGGAAGCCATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCAAGTGATCCCCCACAATTAAAGGCCGCCATGGGGACGATGGATTACATTATCGACACGGTATCTGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAACTGAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCCCTTGAGCTGCCAGTTGCTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTCAGCACAACATCACAGCAGAGATTGAGCTCATTAAGATGGATGAAATTAACAAGGCCATCGAAAGACTTGCAAAAGCCGATGTTCGATACCGGTTCGTGATAGACATTGCAAACTCCTTGAAATAG 1077 44.48 MAKSPEDEHPIKAFGWAARDTSGLLSPFHFSRRENRDDDVSIKVLYCGVCHSDLHLLKNDWGVTNYPIVPGHEIVGVVTSVGKNVKKFKAGDQVGVGVIVGSCRSCENCEQDLENYCPKMTYTYNSHSSDGEKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPPQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVASLVLGRRMVGGSNFGGLKETQEMLDFCAQHNITAEIELIKMDEINKAIERLAKADVRYRFVIDIANSLK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1952535 1955367 + CaPI482276_02g000830.1 Cam02g0083 119825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0083 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cam02g0083 358 FunFam probable cinnamyl alcohol dehydrogenase 16 176 - -
Cam02g0083 358 Gene3D - 16 353 - -
Cam02g0083 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cam02g0083 358 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cam02g0083 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cam02g0083 358 Gene3D - 167 323 - -
Cam02g0083 358 SUPERFAMILY GroES-like 9 199 IPR011032 -
Cam02g0083 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Cam02g0083 358 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
Cam02g0083 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cam02g0083 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0125 Cam-Chr1:1550428 Cam02g0083 Cam-Chr2:1952535 6.20E-102 dispersed
Cam01g1869 Cam-Chr1:32222163 Cam02g0083 Cam-Chr2:1952535 2.10E-150 dispersed
Cam02g0083 Cam-Chr2:1952535 Cam05g1718 Cam-Chr5:25667786 2.70E-121 dispersed
Cam02g0082 Cam-Chr2:1939945 Cam02g0083 Cam-Chr2:1952535 2.80E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0083 K00083 - csv:101205228 600.512