Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g0105 | ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTTTCCAACTTCCTTCAATTCCTCAAACCCATTCTCCTTCCCCTCCATTTGATCCTCCAAATTTCTCCATTTCTAGTAATAATACTAATAATAATAACAATAATAATAATTCCAATCTCAATGAAACCCTACTTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAAGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTCAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCCGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTAA | 741 | 37.79 | MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFFQLPSIPQTHSPSPPFDPPNFSISSNNTNNNNNNNNSNLNETLLSSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2195613 | 2197616 | - | CaPI482276_02g001050.1 | Cam02g0105 | 119847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g0105 | 246 | FunFam | WRKY transcription factor 57 | 155 | 229 | - | - | |
Cam02g0105 | 246 | ProSiteProfiles | WRKY domain profile. | 164 | 229 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam02g0105 | 246 | Gene3D | WRKY domain | 156 | 222 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam02g0105 | 246 | MobiDBLite | consensus disorder prediction | 45 | 79 | - | - | |
Cam02g0105 | 246 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 50 | 232 | IPR044810 | GO:0003700(InterPro) | |
Cam02g0105 | 246 | SMART | WRKY_cls | 169 | 228 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam02g0105 | 246 | Pfam | WRKY DNA -binding domain | 170 | 226 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam02g0105 | 246 | SUPERFAMILY | WRKY DNA-binding domain | 161 | 228 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam02g0105 | 246 | MobiDBLite | consensus disorder prediction | 60 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g1630 | Cam-Chr1:29877258 | Cam02g0105 | Cam-Chr2:2195613 | 1.30E-45 | dispersed | |
Cam02g0105 | Cam-Chr2:2195613 | Cam08g1480 | Cam-Chr8:21065548 | 1.20E-27 | dispersed | |
Cam02g0105 | Cam-Chr2:2195613 | Cam02g0108 | Cam-Chr2:2251604 | 1.20E-19 | proximal | |
Cam05g0011 | Cam-Chr5:608357 | Cam02g0105 | Cam-Chr2:2195613 | 1.20E-37 | transposed | |
Cam01g1637 | Cam-Chr1:29974324 | Cam02g0105 | Cam-Chr2:2195613 | 1.10E-20 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51409 | PF03106 | WRKY | 4.20E-24 | CL0274 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g0105 | - | - | - | 0.0 |