Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0105 ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTTTCCAACTTCCTTCAATTCCTCAAACCCATTCTCCTTCCCCTCCATTTGATCCTCCAAATTTCTCCATTTCTAGTAATAATACTAATAATAATAACAATAATAATAATTCCAATCTCAATGAAACCCTACTTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAAGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTCAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCCGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTAA 741 37.79 MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFFQLPSIPQTHSPSPPFDPPNFSISSNNTNNNNNNNNSNLNETLLSSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2195613 2197616 - CaPI482276_02g001050.1 Cam02g0105 119847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0105 246 FunFam WRKY transcription factor 57 155 229 - -
Cam02g0105 246 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam02g0105 246 Gene3D WRKY domain 156 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam02g0105 246 MobiDBLite consensus disorder prediction 45 79 - -
Cam02g0105 246 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 232 IPR044810 GO:0003700(InterPro)
Cam02g0105 246 SMART WRKY_cls 169 228 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam02g0105 246 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam02g0105 246 SUPERFAMILY WRKY DNA-binding domain 161 228 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam02g0105 246 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1630 Cam-Chr1:29877258 Cam02g0105 Cam-Chr2:2195613 1.30E-45 dispersed
Cam02g0105 Cam-Chr2:2195613 Cam08g1480 Cam-Chr8:21065548 1.20E-27 dispersed
Cam02g0105 Cam-Chr2:2195613 Cam02g0108 Cam-Chr2:2251604 1.20E-19 proximal
Cam05g0011 Cam-Chr5:608357 Cam02g0105 Cam-Chr2:2195613 1.20E-37 transposed
Cam01g1637 Cam-Chr1:29974324 Cam02g0105 Cam-Chr2:2195613 1.10E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51409 PF03106 WRKY 4.20E-24 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0105 - - - 0.0