Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0120 ATGGCTTCTTCAAATCCCATCTCTCTTCTCACATTTCTCACTTTCCTCTTCCTCCTCTCTTCTTCATCTTCCGCTGTCGTTCCAACCGCAGAGATTTGCCAATCCACCGCCTCCCCGTCCTTCTGCAACTCTTTCCTTCCCAACTCCCCGGCCTCGGTCCACTCCCATTGTCGCTTCACTCTCCGCAATGCCCTCGACCATGCACATGCCTTCTTGGCACTCGTCGACTCTCACCTCAGCCTTTTCCCCTCCCTCTCCGCCCTCCACGACTGCCGTGGCCTCGCGGAAGCCAACCTCGACTTTATATCCCAAACTTTTTCCATAGTCAACTCCACAGCCATGGTCCTTCCTTATTACCAAGCCCATGAGATGGTGTCCTTAATGAGTGCAATGATCACCAATGAAGACACTTGTTATGACGGGTTGACGGGTTTAGGCTCGGCCTTGGGCTTGGTTGATAAGGTGTTGGAGGCCATCTCTTTTGATAGAAAGCTATATAGTTTGTACCTTTCGTTGTTCAAAATGGGTTGGGTTTCTGAGGACATGAAGGCTCCTATGTTGCCAAATATGAACCATTTTGGGGTCGGGAAAGGGCAGTTGAAGCTTAAAATGTCGCCCAAAGACCGAGCGTATTATGAGCGCTTGGTGCATAGGAAGAAGCCGGCGGCCGCTAGAAGGCTTCTTCAGACCAATTACCAAGATGATGGAATTTTAATCAATGGCATGGTTGCGGTGGATCAAAATGGAGCATACGATTTTACAACCATCAGCGACGCCATTGCAGCCGCTCCGAACAAGTCAGCTGTCGCTGACGGATACTTCTTGATCTTCGTGACTGCTGGGATTTACAATGAGAGTGTGTTGGTCCCAAAATATAAAAGGTATGTGTTGATGATCGGAGAAGGTAACAACCAAACTATCATCACCGGCAACAAAAACGTCATTGATGGTTCCACCACTTTCAATAGCGCAACCGTTGTCGTGGAGGGAACAGGGTTTTTCGGAGTAAACCTAACGATCAGCAACACTGCTGGCGCCGCCAAACACCAAGCGGTGGCATTACGAGTGAGTGCCGACAATGTGACATTATATAGTTGCAAATTTGAAGGCTATCAAGACACTCTCTACACACACTCCCTCCGTCAATTCTATAGAGAATGTGATATCTATGGTACTGTCGACTTCATCTTCGGTAATGCTGCCGTCGTTTTGCAAAACTGCAACCTCTACGCCCGTCTCCCAATGAGTGGCCAGTTCAACGCCCTCACGGCGCAGGGCCGAACCGACCCCAATCAGAACACTGGAACCTCCATCCACAACTGCACCATCAAGTCGACGTCGGAGCTCGCGGCGAGCCCCGCCACGAAGAGCTATTTAGGGCGGCCGTGGAAGGAATATTCTCGGACAATTTATATGCAATCGTTTATTGATTCCTTTATTGATCCTGCAGGCTGGAAGGAGTGGGACGGCACTTTGAATTTAAACACTTCTTATTACGCCGAGTTTAATAACTCAGGGCCGGGCTCCGACACTTCACGGCGGGCTTCGTGGGTGGTCGGTGTCATCAATGCCACTGTTGCTAGTAACTTCACAGTGTCTCAATTCTTGGCCGGGGATCAATGGCTACCGCCTACCGCCGTGCCCTACACCGGTGGTTTGATATCATAA 1668 50.0 MASSNPISLLTFLTFLFLLSSSSSAVVPTAEICQSTASPSFCNSFLPNSPASVHSHCRFTLRNALDHAHAFLALVDSHLSLFPSLSALHDCRGLAEANLDFISQTFSIVNSTAMVLPYYQAHEMVSLMSAMITNEDTCYDGLTGLGSALGLVDKVLEAISFDRKLYSLYLSLFKMGWVSEDMKAPMLPNMNHFGVGKGQLKLKMSPKDRAYYERLVHRKKPAAARRLLQTNYQDDGILINGMVAVDQNGAYDFTTISDAIAAAPNKSAVADGYFLIFVTAGIYNESVLVPKYKRYVLMIGEGNNQTIITGNKNVIDGSTTFNSATVVVEGTGFFGVNLTISNTAGAAKHQAVALRVSADNVTLYSCKFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYARLPMSGQFNALTAQGRTDPNQNTGTSIHNCTIKSTSELAASPATKSYLGRPWKEYSRTIYMQSFIDSFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRASWVVGVINATVASNFTVSQFLAGDQWLPPTAVPYTGGLIS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2378848 2382255 + CaPI482276_02g001200.1 Cam02g0120 119862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0120 555 FunFam Pectinesterase 238 553 - -
Cam02g0120 555 CDD PMEI-like_3 32 177 - -
Cam02g0120 555 SMART PMEI_2 22 172 IPR006501 GO:0004857(InterPro)
Cam02g0120 555 Pfam Plant invertase/pectin methylesterase inhibitor 31 167 IPR006501 GO:0004857(InterPro)
Cam02g0120 555 Gene3D - 241 555 IPR012334 -
Cam02g0120 555 SUPERFAMILY Pectin lyase-like 240 552 IPR011050 -
Cam02g0120 555 PANTHER PECTINESTERASE 13 544 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cam02g0120 555 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Cam02g0120 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Cam02g0120 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cam02g0120 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0120 Cam-Chr2:2378848 Cam11g1474 Cam-Chr11:27475114 6.60E-151 dispersed
Cam02g0120 Cam-Chr2:2378848 Cam09g0553 Cam-Chr9:5515843 4.60E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0120 K01051 - csv:101216984 939.873