Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0128 ATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTACATGCAGTAGCCAAAGCAATGGGGAAGCAATTTCTTCTTCATGTATGGGAATTGGATTTCGAGGTCGAAAGCGAACGAAAAGAACATTCTCCGACCATGTTTATGCTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATATTCATGAATGGAAAAAGTCGTTCTTCTTGTATTTTCACGCAACAAGGTCGCAAGGGCATAAACCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCGGAGGACACGATCTTTTGTGGTGTATTCGATGGACATGGACCTTACGGTCATCTCGTTGCTCGAAAAGTGAGGGATACATTGCCTATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGACTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACACCTCCAGATTGTGAAGATTCTGAGAAAGATGGTTTTGTAGAGGACTCGCAGAATTCGGTATGGAGAGATGCTTTTTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACACCCTAATCTGGACTGCTTTTGTAGTGGTAGTACTGCAGTCACCATAGTTAAACAGGGGTCAAATCTCTTCATGGGGTATATAGGCGACTCAAGAGCAATCCTTGCCTCGAAGGACGCCAATGATTCCACGGTGGCCGTCCAATTGACCGTGGATCTTAAGCCAGATTTACCAAGAGAAGCTGAAAGAATAAAGCGGTGTAAAGGTAGGGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGGGTGTGGTTACCTTTCGATGATGCGCCCGGTTTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAAGAATATGGAGTTATCTCTATACCCGAATTCTCTCATCGAACCCTCACCGACGCTGATCAGTTCATCGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGACATAGTGTCCTCAGCCCCAACCCGGGCATCAGCTGCAAGGAGGATGGACTCTGAATCCGACTGTGACGAACAAGGCTTCTCATCTGCAACATTGCGTAGTAATCATTCGGGTACTGCTATCGAGTCCGATGATGGCCAGAGGTCTGAGCCATGTTTGCAAAGGAATAACACTGTCAGATCATCCGAAGAAGGCAAGGGATTACCTGTCGAAGACAGGGAGGTTGGTGCTGCTGTACCTGCAGAAGATCAAAACTGGTTGGGTTTGGAAGGAGTCACTCGAGTGAACTCACTTGTTCAACTTCCTAGATTTTCCGAGGAAAGGCCAGTGTCATAG 1323 46.41 MGGCVSTSSHSTCSSQSNGEAISSSCMGIGFRGRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNDSGKTCFQRNLKTPPDCEDSEKDGFVEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVDIVSSAPTRASAARRMDSESDCDEQGFSSATLRSNHSGTAIESDDGQRSEPCLQRNNTVRSSEEGKGLPVEDREVGAAVPAEDQNWLGLEGVTRVNSLVQLPRFSEERPVS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2429839 2431726 + CaPI482276_02g001280.1 Cam02g0128 119870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0128 440 SMART PP2C_4 55 370 IPR001932 -
Cam02g0128 440 MobiDBLite consensus disorder prediction 1 21 - -
Cam02g0128 440 Pfam Protein phosphatase 2C 167 335 IPR001932 -
Cam02g0128 440 SUPERFAMILY PP2C-like 56 344 IPR036457 -
Cam02g0128 440 CDD PP2Cc 65 342 IPR001932 -
Cam02g0128 440 PANTHER PROTEIN PHOSPHATASE 67 345 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g0128 440 MobiDBLite consensus disorder prediction 352 392 - -
Cam02g0128 440 MobiDBLite consensus disorder prediction 336 408 - -
Cam02g0128 440 Gene3D - 59 376 IPR036457 -
Cam02g0128 440 ProSiteProfiles PPM-type phosphatase domain profile. 66 440 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0128 Cam-Chr2:2429839 Cam10g0353 Cam-Chr10:5720285 5.90E-102 dispersed
Cam02g0128 Cam-Chr2:2429839 Cam02g1797 Cam-Chr2:31062390 1.70E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0128 - - - 0.0