Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0162 ATGGTGGCCAAAAGAAGTGTCAAGAACTTGGTCACCATCAGCTGGTTTGCAGAGGTTTTGACGTCTTTTTTTCTTTTGTACTCATTTGTGTTTTTAATTTCTGTCGTTAATTGCTTTTCTAAAGATATCTTAGAGTTTAAGAGTTGCATAAGTGATGAGAGAGGGGATACTCTTGTATCGGCAGGATCGAGATTCGAACTCGGATTCTTTAAGCCATATGGCAGCTCTCATAGCAGAAGATACTTGGGAATATGGTATTACAAATCAAATCCAAGTACGGTTGTTTGGGTTGCCAATCGAGACAGCCCACTTGCAGGTTCAGATGGTATCTTTAAGATTGAGGATGATGGCAACCTCAAAGTATATGATGGAAATCGGAATCTGTATTGGTCAACAAACATTGGAAGTTCTGTACACGATCGAAGGACTCTGAAGTTATTGGATAATGGAAATCTGGTCTTGAGTTATGCAGATCAAGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGTTAATGGATGATAACTTGGTGCTGACTTCATGGAAGAGCTATGATGACCCGGCTCGAGGGAACTTCACTTTTCAGCTAGATCAAGACGGAGGTCAATATGTCATTTGGAAAAGATCAGTTAAATTCTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCATTATCTAAACTGGGAAGATCACAAAGTGTGGTCTCAGATTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTATAATGCGTGTGGAGATTTTGCTAGCTGTAATAGTGAGGGTGGTGTAGCTTGCAAATGCCTGCCTGGTTTTGAACCTACCTCTCCAGGGAGTTGGAATACTGGAGATTATTCAGGTGGATGCATTAGGAAATCACCAATATGCAGTGTCAACGATGACAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCGGACTTCCAGTTTAATGCGAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCAGTGTCAGGCTTACTCATATTTGGAAGCTAATACGTCAAGGCAGGGTTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAGTTTGATAATGGCCGTGACCTCAATGTTCGAGTAGCAGTTAGAGATCTAGAATCAACTGTCAGAAACTGTGGAACATGTGGGACAAACCTCATTCCTTATCCACTTAGCACAGGACCTAAATGTGGTGACCCCATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTAAACTTTGAAGCAGCAGGTGGAACGTACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTTACATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGTTAACCAAAGCCCTTCAGCTGAACCATTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCCGAGAATTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCAGTTGGGAGCCTCCGTTAGAGCCAACTTGTTCTTCAACTACGGACTGCAAAGACTGGCCTTATTCAACTTGCAACATGAGTAAAGATGGAAATAAAAGATGCCTTTGCATAGCAGACTTTCATTGGAATGGCTGGAGCTTGAATTGCACTACAGATCACAACAAAGGAAAGGATGGAAGAGGCAAAACGACCTTCTCTGTGATTATTGTTGCAACATCCATTTGTCTTGTCCTTCTGATGATTCTCTCATGTACTGTGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATTTAATGCTTCACTTGTACGACAATGAGAGACGTGTCAAAGACCTGATCGAATCCGGTCGATTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCAACAGAGAACTTCTCAAATGCAAATAAGCTTGGACAAGGAGGCTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTCTCAAGTGGTTCAGGACAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTGTTAATCGCGAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTACGAATATATGCCAAATAAAAGCTTAGACGCCTTTATATTTGATCAAAAGCTGAGTGTGGCATTGGATTGGGACATCCGCTTCAACGTCATTTTGGGAATTGCTCGTGGCCTTCTTTATTTACACCAAGATTCGAGGTTGAGAATTATTCATAGAGATTTGAAGACGAGCAACATTCTTCTAGATGAGGAGATGAATCCCAAAATATCCGACTTTGGCTTGGCGAGGATCTTTGGAGGGAAAGAAACTGCCACAAATACCAAAAGGGTGGTAGGCACTTATGGATACATGTCACCAGAATATGCATTGGATGGCATATTTTCTGTCAAATCTGACGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTAGTGGAAAAAGGAACACGGGATTCTATCACTTGGAGAAAGCTTTGAGTCTTCTAGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGATTTAATGGAGCAAATACTGAGGGGGAATTGCAAAAGAGATGAATATTTGAAGTGTTTAAATGTGGGGCTGTTGTGTGTGCAGGAAGATCCATGGGATCGACCCACCATGTCGAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCTCCGAAACCACCAGCTTTCGTCGTACGGCGGTGCCCCTCGAGCAGAGCTTCCTCCTCCACCAAACCAGAAACCTTCTCCCATAATGAGTTGACGGTCACCTTAAAAGATGGTAGATAG 3096 41.96 MVAKRSVKNLVTISWFAEVLTSFFLLYSFVFLISVVNCFSKDILEFKSCISDERGDTLVSAGSRFELGFFKPYGSSHSRRYLGIWYYKSNPSTVVWVANRDSPLAGSDGIFKIEDDGNLKVYDGNRNLYWSTNIGSSVHDRRTLKLLDNGNLVLSYADQEDLSEHILWQSFDYPTDTFLPGMLMDDNLVLTSWKSYDDPARGNFTFQLDQDGGQYVIWKRSVKFWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYIDTRLVLNSSGQLHYLNWEDHKVWSQIWVEPRDRCSVYNACGDFASCNSEGGVACKCLPGFEPTSPGSWNTGDYSGGCIRKSPICSVNDDSDTFLSLKMMKAGNPDFQFNAKDDFDCKLECLNNCQCQAYSYLEANTSRQGSACWIWSGDLNNLQDEFDNGRDLNVRVAVRDLESTVRNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVNFEAAGGTYKVKFIDSEARKFYIQTKEAGDCGDKNWLTKALQLNHSSPFHVTSWCNFKETNPENFSLKTSNEVEISWEPPLEPTCSSTTDCKDWPYSTCNMSKDGNKRCLCIADFHWNGWSLNCTTDHNKGKDGRGKTTFSVIIVATSICLVLLMILSCTVFYIYFSKTGLIERQESRGNSQKDLMLHLYDNERRVKDLIESGRFKEDDTNGIDIPFFDLETILIATENFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDIRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTKRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIISGKRNTGFYHLEKALSLLGYAWDLWMKDEGLDLMEQILRGNCKRDEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLKDGR 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2645804 2649543 - CaPI482276_02g001620.1 Cam02g0162 119904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0162 1031 CDD B_lectin 55 174 IPR001480 -
Cam02g0162 1031 Pfam Domain of unknown function (DUF3403) 986 1031 IPR021820 GO:0004674(InterPro)
Cam02g0162 1031 Gene3D Phosphorylase Kinase; domain 1 678 788 - -
Cam02g0162 1031 ProSiteProfiles Bulb-type lectin domain profile. 43 167 IPR001480 -
Cam02g0162 1031 SMART serkin_6 713 957 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0162 1031 Pfam Protein tyrosine and serine/threonine kinase 716 981 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0162 1031 Pfam S-locus glycoprotein domain 225 332 IPR000858 GO:0048544(InterPro)
Cam02g0162 1031 SUPERFAMILY Protein kinase-like (PK-like) 697 1014 IPR011009 -
Cam02g0162 1031 ProSiteProfiles Protein kinase domain profile. 713 991 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0162 1031 Pfam D-mannose binding lectin 93 190 IPR001480 -
Cam02g0162 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0162 1031 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 199 IPR036426 -
Cam02g0162 1031 MobiDBLite consensus disorder prediction 1006 1031 - -
Cam02g0162 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 789 992 - -
Cam02g0162 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 171 - -
Cam02g0162 1031 SMART blect_4 47 174 IPR001480 -
Cam02g0162 1031 CDD PAN_AP_plant 353 437 - -
Cam02g0162 1031 CDD STKc_IRAK 719 984 - -
Cam02g0162 1031 Gene3D Transferase(Phosphotransferase) domain 1 789 991 - -
Cam02g0162 1031 MobiDBLite consensus disorder prediction 1006 1024 - -
Cam02g0162 1031 SMART ntp_6 357 436 IPR003609 -
Cam02g0162 1031 Pfam PAN-like domain 353 421 IPR003609 -
Cam02g0162 1031 ProSiteProfiles PAN/Apple domain profile. 353 437 IPR003609 -
Cam02g0162 1031 Gene3D - 43 171 IPR036426 -
Cam02g0162 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 678 788 - -
Cam02g0162 1031 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 41 998 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0162 Cam-Chr2:2645804 Cam03g0542 Cam-Chr3:6274398 2.10E-166 dispersed
Cam02g0158 Cam-Chr2:2627622 Cam02g0162 Cam-Chr2:2645804 5.40E-66 proximal
Cam02g1175 Cam-Chr2:23257805 Cam02g0162 Cam-Chr2:2645804 2.00E-270 transposed
Cam04g1140 Cam-Chr4:25477286 Cam02g0162 Cam-Chr2:2645804 1.60E-98 transposed
Cam01g2300 Cam-Chr1:35192918 Cam02g0162 Cam-Chr2:2645804 3.00E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84939 PF07714 PK_Tyr_Ser-Thr 5.00E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0162 - - - 0.0