Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0188 ATGCTTGTATCATCTTTTTCGAACATCGTTGGAGCAAAAAAATTGGCGGTCGGATTTTATCGGGGTAGCTGCCCGGGGGTGGAGTATATTGTTGCCAAAACAGTAGCTCAATATATTAAGAAACAACCAACTCTTGCTCCTTCTTTGTTGAGAATACACTTCCATGACTGCTTTGTTAGGGGTTGTGATGGTTCTGTGCTATTAAATTCCAAGCCAAACAACCAAGCTGAGAAAGATTCTTTTCCCAACCTTAGTTTAAGAGGTTTTAATGTCGTTGACGCTGTTAAAGCTGCTGTCGAAAAGCAATGCCCTGGTGTCGTTTCTTGTGCTGATATTCTCGCTTTGATAGCTCGCGATGCCGTTAGAATGATTGGAGGGCCGCTGTGGGAAGTTCCAACAGGAAGAAGAGATGGAAGAGTATCCATCTCCAGAGAAGCGTTGATCAATTTGCCGCCTCCCTTCGCTAATATCTCTTCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTTTCCGTCAAAGATCTGGTCGTTTTATCCGGATCACACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGTCTCTACAATTTCACCGGCAAAGGTGACGTCGATCCTAAACTAGACAAATACTACGCCGTTGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGATACCAAAGCTTACGTACTGCTTCAGGCAAGTACACGTGGCGCTACTTTTGCCGCCGATTTCGCTAAATCCATGGTGAATATGGGGAATATCGGTGTCCTCACCGGCACCGACGGCGAAATTAGGCGGCGATGTGCTTTTGTTGCTTGTTCCATGATTTTCCTTTATGTGCAACGGGACCTGGCTCAGTACGCTTATTCCACACCATTCGAGGACCTCTTTTCCTCTTATGATGATGTGGACTTATTAGGACTTGCTAGCTCAAGCCAAGCTCAGCTAGAGCTTGGCTACTATGGAAAGAGCTGCCCTCATGCTGAGAAAATCGTCTACGATTACGTTTACAAGAACATTCCCAAGGTTCCTACCTTGGCTTCTGCCTTACTTAGAATGCATTTCCACGACTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTTTGAACTCAACTATGAACAACCAAAGTGAGAAAGTATCTCCACCAAATCTAACACTGAGAGGCTTCGACTTCATTGATAAAATTAAGAAACTTTTGGAAGCTGAATGCCCTGGAGTCGTCTCCTGCGCCGACATTATTTCTTTAGTTGCAAGAGACTCCGTCGTTGCTATCGGCGGTCCATTCTGGAGGGTTCCGACCGGAAGGAGAGATGGTTTGATCTCAAGATCCTCAGAAGCTTTGGTGAACATTCCTCCACCGTTTGCCAATTTGTCAACTCTACAACAACAATTCGCTAACAAGGGTCTTGATCTCAAAGACTTGGTTTTGCTTTCAGGAGCGCACACAATTGGGGTATCTCACTGCTCGTCCTTTACGCGGCGGCTCTACAACTTCACCGGCGTGGGAGATCAAGACCCATCACTCGACAGTCAGTACGCCGCAAATCTCAAGGCAAACAAATGCAAAAGCATTAGCGCCAACGGCATTGTGGAAATGGACCCTGGCAGTTTCAAAACCTTCGATCTCAGCTACTACTCCCTTCTTCTGAAGCGCCGAGGGCTGTTCCAGTCCGACGCGGCTCTGACCACCAGCGCAGCCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCCGTTCAGAACTTTTTCGCCCAGTTTGGGTTAGCCATGGAGAAGATGGGTCGCATAGGGGTCAAGACTGGGTCCGAGGGAAAAATCTAA 1947 47.46 MLVSSFSNIVGAKKLAVGFYRGSCPGVEYIVAKTVAQYIKKQPTLAPSLLRIHFHDCFVRGCDGSVLLNSKPNNQAEKDSFPNLSLRGFNVVDAVKAAVEKQCPGVVSCADILALIARDAVRMIGGPLWEVPTGRRDGRVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGSHTIGVSHCTSFSNRLYNFTGKGDVDPKLDKYYAVALKNKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYVLLQASTRGATFAADFAKSMVNMGNIGVLTGTDGEIRRRCAFVACSMIFLYVQRDLAQYAYSTPFEDLFSSYDDVDLLGLASSSQAQLELGYYGKSCPHAEKIVYDYVYKNIPKVPTLASALLRMHFHDCFVRGCDASVLLNSTMNNQSEKVSPPNLTLRGFDFIDKIKKLLEAECPGVVSCADIISLVARDSVVAIGGPFWRVPTGRRDGLISRSSEALVNIPPPFANLSTLQQQFANKGLDLKDLVLLSGAHTIGVSHCSSFTRRLYNFTGVGDQDPSLDSQYAANLKANKCKSISANGIVEMDPGSFKTFDLSYYSLLLKRRGLFQSDAALTTSAATKAFVTDLLNGSVQNFFAQFGLAMEKMGRIGVKTGSEGKI 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2812730 2822046 - CaPI482276_02g001880.1 Cam02g0188 119930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0188 648 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 FunFam Peroxidase 151 292 - -
Cam02g0188 648 ProSiteProfiles Plant heme peroxidase family profile. 14 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601(InterPro)
Cam02g0188 648 Pfam Peroxidase 31 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 Pfam Peroxidase 377 616 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PANTHER PEROXIDASE 25-RELATED 16 309 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam02g0188 648 Gene3D - 361 648 - -
Cam02g0188 648 CDD secretory_peroxidase 356 648 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g0188 648 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Cam02g0188 648 Gene3D - 18 312 - -
Cam02g0188 648 SUPERFAMILY Heme-dependent peroxidases 356 648 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 CDD secretory_peroxidase 14 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g0188 648 ProSitePatterns Peroxidases active site signature. 388 399 IPR019794 GO:0004601(InterPro)
Cam02g0188 648 Gene3D Peroxidase, domain 2 493 635 - -
Cam02g0188 648 FunFam Peroxidase 493 635 - -
Cam02g0188 648 FunFam Peroxidase 18 161 - -
Cam02g0188 648 SUPERFAMILY Heme-dependent peroxidases 15 312 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Haem peroxidase superfamily signature 575 590 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 ProSitePatterns Peroxidases proximal heme-ligand signature. 515 525 IPR019793 -
Cam02g0188 648 ProSiteProfiles Plant heme peroxidase family profile. 356 648 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g0188 648 FunFam Peroxidase 360 503 - -
Cam02g0188 648 Gene3D Peroxidase, domain 2 151 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0188 Cam-Chr2:2812730 Cam06g0554 Cam-Chr6:7626563 2.60E-82 dispersed
Cam02g0188 Cam-Chr2:2812730 Cam02g0189 Cam-Chr2:2828229 9.10E-152 tandem
Cam01g1227 Cam-Chr1:20565666 Cam02g0188 Cam-Chr2:2812730 2.60E-62 transposed
Cam09g1701 Cam-Chr9:29963728 Cam02g0188 Cam-Chr2:2812730 6.00E-59 transposed
Cam02g0188 Cam-Chr2:2812730 Cam02g0980 Cam-Chr2:14522861 4.00E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0188 K00430 - sly:101247458 577.4