Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0192 ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTAATGGATCGTTGGACCCTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGCCCTTTGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTGATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGA 1158 43.61 MSRRINYEILSAPSVRLRIHIFFSRANILFAGWLPVFYPGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDRWTLLINDDAFPAFSSRLRHLTHHFIEYGPVSALWFYALRLRIHTFFSWVRVSLLCLLVLFFLFLGSNRKIRLFSGIFEELNLRAHNLFAGYLCSTPDSQVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQSIVQPFALLSRDRIVFLAFLFIHETAAFGHYSPTPD 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2841989 2848629 + CaPI482276_02g001920.1 Cam02g0192 119934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0192 385 FunFam Eukaryotic translation initiation factor SUI1 255 358 - -
Cam02g0192 385 ProSiteProfiles Translation initiation factor SUI1 family profile. 281 351 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 Pfam Translation initiation factor SUI1 72 146 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 Pfam Translation initiation factor SUI1 278 349 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 CDD eIF1_SUI1 279 349 IPR005874 GO:0003743(InterPro)
Cam02g0192 385 FunFam Eukaryotic translation initiation factor SUI1 46 157 - -
Cam02g0192 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 45 155 - GO:0003723(PANTHER)
Cam02g0192 385 NCBIfam translation initiation factor SUI1 50 155 IPR005874 GO:0003743(InterPro)
Cam02g0192 385 NCBIfam translation initiation factor SUI1 261 350 IPR005874 GO:0003743(InterPro)
Cam02g0192 385 SUPERFAMILY eIF1-like 42 156 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 ProSiteProfiles Translation initiation factor SUI1 family profile. 75 145 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 CDD eIF1_SUI1 73 155 IPR005874 GO:0003743(InterPro)
Cam02g0192 385 SUPERFAMILY eIF1-like 273 350 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam02g0192 385 Gene3D - 253 356 - -
Cam02g0192 385 Gene3D - 41 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0192 Cam-Chr2:2841989 Cam10g0497 Cam-Chr10:7439529 1.20E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0192 K03113 - csv:101219651 223.787