Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0216 ATGGCCTGGACCCGACGATCCGCCGTCGGAAACGGCTCATCCGCCACCGTCTACCTCGCCTCCATCGCCTCCTCCGGCGAGCTATTCGCCGTCAAGTCCGCCGAGCTTCTCAAATCAGACTTCTTGAAAACAGAGCAGAGGATTCTTTCTTCCCTTTCCCACCCTTCAATTGTGGGCTACAGGGGATTCGATGTAACGACAGAAAATGGGAAGCTAATGTACAATCTCTTCATGGAGTACGTCGCCGGTGGCACTCTCACCGAAGAAATTGTCCGACGCGGCGGCAGGATTAAGGAGGCGGCGGCGGCGTTTTACACGCGTCAAATTGTTAGAGGTTTGGAGTACTTGCACAAACAGGGCTTGGTGCATTGTGATATCAAAGCTAAGAACATTTTAATCGGTGGAGATGGTTTGAAGATTGCTGATTTCGGTTGCTCCAAATGGGTTTCTGAGACGGAGGCGGTAATCGGCGGAACGCCGATGTTCATGGCACCGGAAGTGGCGCGTGGGGAAAAACAGGGGATTTCCTCTGACATATGGGCACTTGGGTGTACTTTAATCGAAATGGTCACCGGCGCTTCACCATGGCCCATCTCCGGCGACCCTGTTTCAGTGCTGTACCGGATCGGATATTCCGGCGAATCGCCGGCAATTCCGAGTTTTCTATCGGAGAAAGGGAAGGATTTTTTAAGGAAATGCTTGAGAAGGGACCCAACAGAAAGATGGAGCGCGAATCAACTTCTTGAACATCCATTTTTTGTGGAATTGAGTTCTGGGTTGGAGGAAATCAAGGAATTACATCCACATTCGGAATCTCCGACGAGTATTTTGGATCAAAGCCTCTGGAATTGGTTAGAAGAAGAATCAGAAACTCTGTTGAAAACAGAGCAATGGGATGACGACGACGACGACGACAGAATCAAAGGGCTAGCGATGTTTTCAGGAGAAATTAAATGGGAATTGGGAGATGAGAATTGGATCACAATCAGAAGCTGTGTAGATAGTGAAGATGAAGAAGAATCCAATTTTAGAAGAAATGATTTAGACTTAGTGGAACAGGAAAGAATAGGTAGTGGGAAAATCCAGTGTTTGGAATTGTTAGATAAAACAGTTAGCTTTAGAGTAAGGAAAAGTAATATTCTAATTAGTGAAATTAGTACCAACATTGGACAAATCTAA 1179 46.65 MAWTRRSAVGNGSSATVYLASIASSGELFAVKSAELLKSDFLKTEQRILSSLSHPSIVGYRGFDVTTENGKLMYNLFMEYVAGGTLTEEIVRRGGRIKEAAAAFYTRQIVRGLEYLHKQGLVHCDIKAKNILIGGDGLKIADFGCSKWVSETEAVIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGASPWPISGDPVSVLYRIGYSGESPAIPSFLSEKGKDFLRKCLRRDPTERWSANQLLEHPFFVELSSGLEEIKELHPHSESPTSILDQSLWNWLEEESETLLKTEQWDDDDDDDRIKGLAMFSGEIKWELGDENWITIRSCVDSEDEEESNFRRNDLDLVEQERIGSGKIQCLELLDKTVSFRVRKSNILISEISTNIGQI 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3088457 3089635 - CaPI482276_02g002160.1 Cam02g0216 119958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0216 392 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0216 392 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Cam02g0216 392 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0216 392 SUPERFAMILY Protein kinase-like (PK-like) 6 292 IPR011009 -
Cam02g0216 392 Gene3D Transferase(Phosphotransferase) domain 1 2 311 - -
Cam02g0216 392 SMART serkin_6 3 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0216 392 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 253 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cam02g0216 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0216 392 CDD STKc_MAPKKK 3 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0216 Cam-Chr2:3088457 Cam03g0061 Cam-Chr3:1552085 4.80E-55 dispersed
Cam09g1076 Cam-Chr9:11121031 Cam02g0216 Cam-Chr2:3088457 1.20E-84 transposed
Cam01g2235 Cam-Chr1:34826418 Cam02g0216 Cam-Chr2:3088457 3.00E-90 wgd
Cam02g0216 Cam-Chr2:3088457 Cam02g0934 Cam-Chr2:13357114 4.10E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84940 PF00069 Pkinase 2.50E-57 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0216 K20716 - csv:101205351 635.565