Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0226 ATGAGCCCTCGATTTGGGTTTTTGTTGTTGTTTTTGTTCTCTGTTTTACTGGGAGCTGATTCAAAGTGCCCTAGAACATGCGATGTAGCTTTAGGTTCGTACTTTGTGTGGGAGGGTAGTACTTTGTCTCTCATCTCTCAAATGTTTCGGTTGCCGTCTCCTGATATAATCGTCAGCTACAATAGAGATAAAATTCCCAACAAAGACAGTGTTAATAGCGGCATCAGAATCAACGTTCCATTCTCCTGTGACTGTATTAGCGATACGTTTCTGGGTCATACGTTTCAGTACCAGATTAATAGTGGAGATACTTACAGTGAAATTGCGACCAAATTCTATTCGAACCTGACTACGGTGGACATGTTACAAAAATTCAATAATTTTGATGTTCTTAATCTTCCTCCAAATGGTATTTTGAATGTGGTAGTGAACTGCTCCTGTGGGAATCCTGAAGTTTCCAAGACATATGGGCTGTTTGTCACTTACCCAATTCGATCCGATGATAGTTGGGATAAGTTGCAAACAGATACAAATGTCAGCTTGTCTTTGCTGCAGCAGTACAATCAAGGTGTGAATTTCAGCCCAGGGAATTTGATCTTTATTCCAGGCAGAGATAAAAGTGGCAACTATCCACCTCTGAATATTAGGTCTTGCAGGAGAAAGTCGAAAAGTTCTAAATTGCTGGCGTTCTCCCAAGAACTGTCTTCTCAAGATGGGCGCGCTCTTGCCCCTGGAAGTTCGTTAGATAAATCTACTGAATCAAATGGTCAAGGTGGTGGTATAGCTGCCGTTACCGGTATTACTGTGGACAAATCAGTGGATTTCTCATATGAAGAACTTGCCAAGGCCACGGACAACTTTAGCTTGGCTAACAAAATCGGTGAAGGTGGTTTCGGATCGGTTTACTATGCAGAACTCAGAGGAGAGAAAGCTGCAATAAAGAAGATGGACATGCAAGCTTCAAGGGAGTTCCTTGCAGAAATTAAGGTTCTAACACGCGTTCACCACTTGAACTTGGTGCGCTTGATAGGATATTGTGTTGAGAATTCTCTATTCCTAGTCTATGAGTACATTGAGAATGGCAACTTGAGCCAACATTTACGTGGCACTGGTGGGGATCCATTGCCGTGGCCTTCTAGGGTCCAAATAGCCCTCGATTCAGCTCGTGGCCTTGAGTATATCCATGAGCACACTGTTCCCGTTTATATTCATCGTGATATTAAATCCGCCAACATATTGATTGACAAAAATTTTCATGGAAAGGTTGCAGACTTTGGGCTAACCAAGTTAACTGAAGTTGGAAATTCTTCACTTCCTACTCGTCTTGTGGGCACATTTGGATATATGCCACCCGAATATGCACAGTACGGTGATGTTTCTCCAAAGATCGATGTATATGCTTTTGGTGTTGTTCTTTATGAGCTTATTTCAGCCAAGGAAGCTGTGGTTAAGACGAACAAAACCAGTGCAATCAATGAATCAAAAGGCCTTGTCGCTTTGTTTGAAGATGTCCTGAATCAACCCGACGCAAAAGAGAACCTTCACAAACTAGTCGACCCAAGACTTGAAGAGAACTACCCTCTCGATTCAGTTTTCAAGATGGCTCAACTTGCCAAGGCATGTACACATGAGAATCCACAGCTACGGCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCTGCAACAGAGGATTGGGACGTCGGCTCTTTCTATGAAAACCAAGCTCTCGTAAACTTGATGTCGGGAAGGTAG 1764 42.8 MSPRFGFLLLFLFSVLLGADSKCPRTCDVALGSYFVWEGSTLSLISQMFRLPSPDIIVSYNRDKIPNKDSVNSGIRINVPFSCDCISDTFLGHTFQYQINSGDTYSEIATKFYSNLTTVDMLQKFNNFDVLNLPPNGILNVVVNCSCGNPEVSKTYGLFVTYPIRSDDSWDKLQTDTNVSLSLLQQYNQGVNFSPGNLIFIPGRDKSGNYPPLNIRSCRRKSKSSKLLAFSQELSSQDGRALAPGSSLDKSTESNGQGGGIAAVTGITVDKSVDFSYEELAKATDNFSLANKIGEGGFGSVYYAELRGEKAAIKKMDMQASREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEYIENGNLSQHLRGTGGDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNKTSAINESKGLVALFEDVLNQPDAKENLHKLVDPRLEENYPLDSVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3169423 3173751 - CaPI482276_02g002260.1 Cam02g0226 119968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0226 587 Gene3D Phosphorylase Kinase; domain 1 273 357 - -
Cam02g0226 587 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 586 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Cam02g0226 587 SMART serkin_6 287 561 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0226 587 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524(InterPro)
Cam02g0226 587 FunFam PTI1-like tyrosine-protein kinase 3 358 573 - -
Cam02g0226 587 Gene3D Transferase(Phosphotransferase) domain 1 358 578 - -
Cam02g0226 587 Pfam LysM domain 97 136 IPR018392 -
Cam02g0226 587 MobiDBLite consensus disorder prediction 238 257 - -
Cam02g0226 587 SUPERFAMILY Protein kinase-like (PK-like) 271 559 IPR011009 -
Cam02g0226 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0226 587 FunFam LysM receptor kinase 2 266 357 - -
Cam02g0226 587 CDD STKc_IRAK 293 556 - -
Cam02g0226 587 Pfam Protein kinase domain 289 556 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0226 587 ProSiteProfiles Protein kinase domain profile. 287 562 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0226 Cam-Chr2:3169423 Cam05g2759 Cam-Chr5:34820014 4.20E-79 dispersed
Cam02g0226 Cam-Chr2:3169423 Cam06g0920 Cam-Chr6:13690277 3.20E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84941 PF00069 Pkinase 3.40E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0226 K13429 - csv:101203576 1042.72