Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0235 ATGGCACAGTTGCCACCCAAAATCCCAAATATGACGCCTAATTGGCCCGACTTTTCCCGGCAGAAAATCCCTTCAATGGAAACCTTTGCACCGCCCACCACCACGCCGGCGGTTACTCAAAATAATCCTTCTTGGGTCGATGAATTTCTCGATTTTTCTTCTGCTAGACGTGGATCCCACCGTCGGTCTGTTAGTGATTCCATCACATTCCTCGAAATGCCAATGCTCGAGGAAGATTGCCGGACTGCCGCTGCTGCACCGCCCCCGCCGCCCCCGGGATCCGGTGACCGGAATGAATTTGATAGATTCGATGACGAGCAATTCCTGTCGATGTTTAATGATGAAATCTCCGCCGCCGTCGCTCCCACCTTGTCGTCGTCGAACCCCTCCACGCCGTCGGATCATAATAGTATTAACGACGAGAAAGACGCCCAAAACGACGGTAAGCAAAATCAGAACAAAAACGAATCCGACGAAGTACAGAGCCAACAGCAATCGGAAAACCAAACACAATCCAATTCCATGGCGACGGCGGCAACGGCGGCTTCCACTGATCGGATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCACAAAGATCACGAGTAAGGAAGCTTCAATACATATCAGAACTCGAACGAAGCGTTACATCGTTACAGGCTGAAGTATCGGTGCTATCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTTAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGATAAGATTTTTAAAGATGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGACTAAGACAAGTATATCACCAACAAAACATTAAGAAGATGGAAAACAATGCAGCACCATCACCGGCGATTACTCCGTCCCAACCCGTCACCGCCATCGCCACAGATGCCAAACTTCCTAACATAGATCAAAACGAGCAAGTTCCGAACATCGTCGTTTAG 996 49.2 MAQLPPKIPNMTPNWPDFSRQKIPSMETFAPPTTTPAVTQNNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDCRTAAAAPPPPPPGSGDRNEFDRFDDEQFLSMFNDEISAAVAPTLSSSNPSTPSDHNSINDEKDAQNDGKQNQNKNESDEVQSQQQSENQTQSNSMATAATAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMENNAAPSPAITPSQPVTAIATDAKLPNIDQNEQVPNIVV 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3256450 3259534 - CaPI482276_02g002350.1 Cam02g0235 119977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0235 331 Gene3D - 190 261 - -
Cam02g0235 331 MobiDBLite consensus disorder prediction 1 21 - -
Cam02g0235 331 SMART brlzneu 187 251 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 SUPERFAMILY Leucine zipper domain 191 245 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 241 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 Pfam Basic region leucine zipper 188 236 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 Coils Coil 270 290 - -
Cam02g0235 331 CDD bZIP_plant_RF2 192 242 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam02g0235 331 MobiDBLite consensus disorder prediction 122 193 - -
Cam02g0235 331 MobiDBLite consensus disorder prediction 136 154 - -
Cam02g0235 331 PANTHER BASIC LEUCINE ZIPPER 34 1 306 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Cam02g0235 331 MobiDBLite consensus disorder prediction 79 101 - -
Cam02g0235 331 MobiDBLite consensus disorder prediction 155 184 - -
Cam02g0235 331 FunFam Basic leucine zipper 61 190 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0235 Cam-Chr2:3256450 Cam11g1797 Cam-Chr11:30498494 1.50E-54 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51427 PF07716 bZIP_2 4.10E-09 CL0018 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0235 - - - 0.0