Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0250 ATGCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTCCATTGGTTTGTTCCCTCAATCAAGAAGGACTATATCTTCAGCGAGTCAAACTCGGTCTCTCCGATCCCACTCACTCCCTCTCTTCATGGAACCCACGCGACGACACTCCCTGCAACTGGTCCGGCGTTACTTGCGATTCCGTTACTCGTTCTGTTATCGCCCTCGACCTCTCCGATTTTCAGATCGCCGGACAGTTTCCCACTTTCGTTTGTCGTCTTCCTTCTCTTTCTTCACTATCTCTTTCCAATAACGCTATTAACGCTTCTCTTCCTGACGATGTCGCTTCCTGTTCTAGCCTCCAGTGGCTTAACTTGTCTCAGAATCTTCTTGCTGGTTCTATTCCCGATGCGATTTCCAAGATCTCGAATCTTCGCTCACTGGATCTCTCTGGAAACAACTTTTCCGGGGAGATTCCGACCAGTTTCGGTGGGTTTCAGCGACTTGAGACGCTGAATTTAGTTGATAATCTTTTGGAGGGAACTATTCCGGGGAGTTTGGGTAACATTTCGAGTTTGAAAGAGCTTCAACTCGCTTACAATCCGTTTACGCGGAGTGAGATACCGAGTGCATTCGGGAACTTGACGAACCTGGAGGTTCTCTGGCTTGCTAACTGTAATCTTGTCGGTCAGATTCCGGCAACTGTTGGCCGGATGACTCGGCTTACGAATCTTGACTTGTCCAATAATAGACTCAGTGGGTCGATTCCGGTTTCACTCACTCAAATGAAAAGTTTAGTTCAAATTGAACTATTTAACAACTCGCTCTCCGGGGAGTTGCCTATGGGACTGTCTAATTTAACTGCACTTCGAAGAATTGATGTGTCGATGAATCACTTGACTGGAACAATTCCGGATGAACTGTGTGCATTACAGCTTGAGTCGCTAAATTTGTTCGAGAATCGATTGGAAGGGCCTTTGCCGGAGAGTATCGTTAATTCCCCTTACTTGAATGAGCTCAAATTGTTTAACAACAAGCTTAGTGGACAGTTACCGAGTAAACTCGGCCAAAACTCGCCATTAGTGCATCTTGATGTTTCATACAACGGATTTTCTGGCGGAATCCCTGAAAACTTGTGTGCAAAAGGGACATTGGAAGAACTTATATTGATTTACAATTCGTTTTCCGGAAGAATCCCGGCAAGTCTTGGAAAATGCAGCAGCTTAAGCCGGATTCGAATGAGGAACAACAGACTCTCGGGTGCGGTTCCTGATGAATTCTGGGGTCTGCCCAATGTCTATTTGCTTGAGCTCGTTGAGAATTCTCTTTCTGGGTCTATTTCTTCGATGATAGCTAGCGCTAAGAATCTCTCTATTTTGATGATCTCAGAAAATCAATTTTCAGGGTTAATTCCTTCCGAGATTGGGTCGTTAAGCAATCTGACTGAACTTTCAGGTAGTGACAATATGTTTTCTGGTCGAATCCCGGGAACTTGGGTAAAGTTAAACTTGTTGAGTACACTCGATCTAAGCAAGAACAAACTTTCTGGTGAATTGCCAATGGGAATTGGAGCTTTGAAAAGGCTAAACGAGTTAAATTTAGCAAACAACAGGCTATCTGGCAATATCCCGAGTGAAATTGGAAGCCTACCTGTGCTTAATTATCTCGATCTTTCAAGTAACCATCTCAGTGGAAGTATACCCCTTGAATTGCAGAATTTGAAACTGAATTCGCTAAATCTGTCGAACAATCGATTATCAGGAGTACTTCCTCCTCTTTATGCAGAGGATATTTACAGAGATAGCTTTCTGGGTAATCCAGGTTTGTGCAATAACGACCCAAGTCTTTGTCCTCATGTTGGAAAAGGCAAAAACCAAGGCTATTGGCTTCTCAGATCCATTTTTCTACTTGCTATCATTGTTTTTTTTGTTGGGGTCATTTGGTTTTTCTTGAAGTACAAGGAATTCAAGAAGAGTAAAAAAGGAATTGCCATGTCCAAGTGGAAATCATTTCATAAGCATGGTTTTAGTGAATATGAAATAGCAGATTGCCTCAGTGAAGACAAAGTCATTGGAAGTGGAGCATCTGGCAAAGTGTACAAAGTTGTGCTAAAAAACGGCGAGATCGTGGCGGTGAAGAAGCTATGGCAAGGAGCAAGAAAAGAGGACACAAGTTTGGATTCAGAGAAAGATGGATTTGAAGCTGAAGTTGAGACTTTAGGGAAGATCCGTCACAAGAATATTGTAAGGTTATGGTGCTGCTGCAACACAGGCAACTGCAAGCTGCTTGTTTATGAGTACATGCCTAATGGAAGCTTGGGAGATTTGTTGCACGGCAGCAAAAAGCGCTTTCTGGATTGGCCTACAAGGTATAAAGTAGTTTTGGATGCAGCTGAAGGGCTTTCTTACTTGCATCACGACTGTGCTCCTCCAATTGTTCATAGGGATATTAAATCCAACAATATATTGCTTGATTCTGAGTTTGGAGCTAGAGTTGCTGACTTTGGATTGGCAAAGTTTTTGAACGCTGGCAAGGGATCAGAATCGATGTCTGTCATTGCCGGTTCTTGTGGTTATATTGCACCAGAATATGCTTATACTTTAAGAGTAAACGAAAAGAGTGACATCTACAGCTTTGGGGTGGTGATTTTAGAGCTAGTGACAGGGCGGCCTCCAAATGATCCAGAATTTGGGGATAGAGACTTGACAAAGTGGGTCTATGCCACCGTCGATGGTAGAGGACTCGATCGAGTGATTGATCCGAAACTCGGTTCTGAATACAAGGAAGAAATATACAGAGTCCTTGACGTGGGACTGCTTTGCACAAGCTCACTTCCCATCAACCGCCCTTCAATGAGACGAGTCGTTAAACTGCTGCAGGAGGCTGCCACAGAGACCAGACCCGCCATTGTTAAAAAGGAACCCAAACTTTCTCCATATTTCTCCTAG 2946 43.52 MPSLLLLLLLLLLLLLLLSSPLVCSLNQEGLYLQRVKLGLSDPTHSLSSWNPRDDTPCNWSGVTCDSVTRSVIALDLSDFQIAGQFPTFVCRLPSLSSLSLSNNAINASLPDDVASCSSLQWLNLSQNLLAGSIPDAISKISNLRSLDLSGNNFSGEIPTSFGGFQRLETLNLVDNLLEGTIPGSLGNISSLKELQLAYNPFTRSEIPSAFGNLTNLEVLWLANCNLVGQIPATVGRMTRLTNLDLSNNRLSGSIPVSLTQMKSLVQIELFNNSLSGELPMGLSNLTALRRIDVSMNHLTGTIPDELCALQLESLNLFENRLEGPLPESIVNSPYLNELKLFNNKLSGQLPSKLGQNSPLVHLDVSYNGFSGGIPENLCAKGTLEELILIYNSFSGRIPASLGKCSSLSRIRMRNNRLSGAVPDEFWGLPNVYLLELVENSLSGSISSMIASAKNLSILMISENQFSGLIPSEIGSLSNLTELSGSDNMFSGRIPGTWVKLNLLSTLDLSKNKLSGELPMGIGALKRLNELNLANNRLSGNIPSEIGSLPVLNYLDLSSNHLSGSIPLELQNLKLNSLNLSNNRLSGVLPPLYAEDIYRDSFLGNPGLCNNDPSLCPHVGKGKNQGYWLLRSIFLLAIIVFFVGVIWFFLKYKEFKKSKKGIAMSKWKSFHKHGFSEYEIADCLSEDKVIGSGASGKVYKVVLKNGEIVAVKKLWQGARKEDTSLDSEKDGFEAEVETLGKIRHKNIVRLWCCCNTGNCKLLVYEYMPNGSLGDLLHGSKKRFLDWPTRYKVVLDAAEGLSYLHHDCAPPIVHRDIKSNNILLDSEFGARVADFGLAKFLNAGKGSESMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPNDPEFGDRDLTKWVYATVDGRGLDRVIDPKLGSEYKEEIYRVLDVGLLCTSSLPINRPSMRRVVKLLQEAATETRPAIVKKEPKLSPYFS 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3377187 3380422 - CaPI482276_02g002500.1 Cam02g0250 119992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0250 981 PANTHER RECEPTOR-LIKE PROTEIN 55 384 958 - -
Cam02g0250 981 ProSiteProfiles Protein kinase domain profile. 684 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0250 981 FunFam Receptor-like protein kinase HSL1 667 766 - -
Cam02g0250 981 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Cam02g0250 981 FunFam Leucine-rich receptor-like protein kinase family protein 207 305 - -
Cam02g0250 981 Pfam Protein kinase domain 686 894 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0250 981 SUPERFAMILY Protein kinase-like (PK-like) 677 958 IPR011009 -
Cam02g0250 981 Gene3D Ribonuclease Inhibitor 283 619 IPR032675 -
Cam02g0250 981 SMART LRR_typ_2 141 164 IPR003591 -
Cam02g0250 981 SMART LRR_typ_2 525 549 IPR003591 -
Cam02g0250 981 SMART LRR_typ_2 238 262 IPR003591 -
Cam02g0250 981 SMART LRR_typ_2 189 213 IPR003591 -
Cam02g0250 981 SMART LRR_typ_2 286 310 IPR003591 -
Cam02g0250 981 SMART LRR_typ_2 93 117 IPR003591 -
Cam02g0250 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0250 981 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524(InterPro)
Cam02g0250 981 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Cam02g0250 981 SUPERFAMILY L domain-like 360 610 - -
Cam02g0250 981 Gene3D Phosphorylase Kinase; domain 1 666 766 - -
Cam02g0250 981 FunFam Receptor-like protein kinase HSL1 311 618 - -
Cam02g0250 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 975 - -
Cam02g0250 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 26 189 - -
Cam02g0250 981 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Cam02g0250 981 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 504 524 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 360 379 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 191 214 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 216 237 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 455 477 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 289 310 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 311 332 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 552 573 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 528 549 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 574 591 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Pfam Leucine Rich Repeat 167 188 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 Gene3D Transferase(Phosphotransferase) domain 1 767 975 - -
Cam02g0250 981 ProSiteProfiles Leucine-rich repeat profile. 240 262 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 SMART serkin_6 684 980 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0250 981 PRINTS Leucine-rich repeat signature 241 254 - -
Cam02g0250 981 PRINTS Leucine-rich repeat signature 549 562 - -
Cam02g0250 981 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515(InterPro)
Cam02g0250 981 SUPERFAMILY RNI-like 75 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2390 Cam-Chr1:35856006 Cam02g0250 Cam-Chr2:3377187 9.50E-132 dispersed
Cam02g0250 Cam-Chr2:3377187 Cam10g0787 Cam-Chr10:14888227 7.70E-94 dispersed
Cam02g0250 Cam-Chr2:3377187 Cam03g0640 Cam-Chr3:7257531 8.90E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84942 PF00069 Pkinase 1.40E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0250 - - - 0.0