Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g0291 | ATGGCCACCTCTGCTATCCAACAGTCCGCCTTCGCCGGCCAGGCTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAGGGTTGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGACGAACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGACCAGATCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCCGGTGACTATGGATGGGACACAGCCGGTCTATCAGCAGATCCCGAGACTTTTGCGAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCGATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAACTCCTTGCAAAGAATGGTGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTGTCCAGGTTGTGCTCATGGGCTTCGTTGAAGGTTACCGAGTTGGTGGTGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTCGACCCACTCGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTTGTCCAGGCTATCGTCACAGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTCCCCGGAAAATGA | 798 | 52.51 | MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3687370 | 3688560 | - | CaPI482276_02g002910.1 | Cam02g0291 | 120033 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g0291 | 265 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 56 | 258 | - | - | |
Cam02g0291 | 265 | Pfam | Chlorophyll A-B binding protein | 66 | 232 | IPR022796 | - | |
Cam02g0291 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - | |
Cam02g0291 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Cam02g0291 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 2 | 265 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0291 | Cam-Chr2:3687370 | Cam02g1907 | Cam-Chr2:32135436 | 2.90E-120 | dispersed | |
Cam02g0291 | Cam-Chr2:3687370 | Cam01g2494 | Cam-Chr1:36640626 | 9.90E-121 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g0291 | K08913 | - | csv:101212963 | 526.939 |