Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0291 ATGGCCACCTCTGCTATCCAACAGTCCGCCTTCGCCGGCCAGGCTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAGGGTTGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGACGAACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGACCAGATCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCCGGTGACTATGGATGGGACACAGCCGGTCTATCAGCAGATCCCGAGACTTTTGCGAAGAACCGTGAGCTTGAGGTGATCCACTCCCGATGGGCGATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAACTCCTTGCAAAGAATGGTGTCCAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTGTCCAGGTTGTGCTCATGGGCTTCGTTGAAGGTTACCGAGTTGGTGGTGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTCGACCCACTCGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTTGTCCAGGCTATCGTCACAGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTCCCCGGAAAATGA 798 52.51 MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3687370 3688560 - CaPI482276_02g002910.1 Cam02g0291 120033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0291 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Cam02g0291 265 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Cam02g0291 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cam02g0291 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cam02g0291 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0291 Cam-Chr2:3687370 Cam02g1907 Cam-Chr2:32135436 2.90E-120 dispersed
Cam02g0291 Cam-Chr2:3687370 Cam01g2494 Cam-Chr1:36640626 9.90E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0291 K08913 - csv:101212963 526.939