Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0319 ATGAAACAAATTCTTCTTCTTCATCTTCTTCTTCTCCTTCCATTCATACTTCTCACTCCCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCATTCCCACGGCGGTCGAAAACCGGCCAATATCGTCACCGATTCTCACCACGAATTCCTCCGACCGTTTCTTGAAAGTGAAGAGGAGTTTACCGGAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGCACCCGAAAGTGGTGTCGATTTTTTTGAATAGAGGAAGAAAGTTACACACAACAAGATCATGGGAGTTCATGGGAATGGAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCATTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCCGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCCAAGGGAAAGATTCTCGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTATTGGCTGGTGCCATGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACACGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTTCCTGAGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAATGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCCGGAACGTACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGGACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGAAGAACTATGTATACGGTGATTTGATATGGTCGGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGGTAGTTTAG 2307 46.25 MKQILLLHLLLLLPFILLTPTSAIKRSYVVYMGAHSHGGRKPANIVTDSHHEFLRPFLESEEEFTGDAIFYSYTRHINGFAAMLEDEVAAQLAKHPKVVSIFLNRGRKLHTTRSWEFMGMENNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRKLIGARYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAMGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPEAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLDFTRLGEEQSFKVFMKVKEQNVGRKNYVYGDLIWSDGKHHVRSPIVVKVV 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3945034 3955029 + CaPI482276_02g003190.1 Cam02g0319 120061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0319 768 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cam02g0319 768 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cam02g0319 768 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cam02g0319 768 SUPERFAMILY Subtilisin-like 109 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g0319 768 CDD PA_subtilisin_like 356 486 - -
Cam02g0319 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Cam02g0319 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Cam02g0319 768 CDD Peptidases_S8_3 108 591 IPR034197 -
Cam02g0319 768 FunFam Subtilisin-like protease SBT5.3 17 110 - -
Cam02g0319 768 ProSiteProfiles Serine proteases, subtilase domain profile. 114 624 - -
Cam02g0319 768 Gene3D Peptidase S8/S53 domain 141 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g0319 768 Gene3D - 349 493 - -
Cam02g0319 768 SUPERFAMILY PA domain 408 491 IPR046450 -
Cam02g0319 768 FunFam Subtilisin-like protease SBT1.5 141 361 - -
Cam02g0319 768 Pfam Subtilase family 139 593 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam02g0319 768 Pfam Fibronectin type-III domain 669 765 IPR041469 -
Cam02g0319 768 Pfam PA domain 397 470 IPR003137 -
Cam02g0319 768 Pfam Peptidase inhibitor I9 27 110 IPR010259 -
Cam02g0319 768 Gene3D - 641 768 - -
Cam02g0319 768 FunFam subtilisin-like protease SBT1.5 349 493 - -
Cam02g0319 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 764 IPR045051 -
Cam02g0319 768 FunFam p69E protein-like 641 768 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1175 Cam-Chr1:18617582 Cam02g0319 Cam-Chr2:3945034 7.80E-251 dispersed
Cam02g0319 Cam-Chr2:3945034 Cam10g0384 Cam-Chr10:6132975 7.30E-257 dispersed
Cam01g1298 Cam-Chr1:24615135 Cam02g0319 Cam-Chr2:3945034 3.30E-135 transposed
Cam01g2470 Cam-Chr1:36436408 Cam02g0319 Cam-Chr2:3945034 2.10E-171 transposed
Cam10g0380 Cam-Chr10:6082266 Cam02g0319 Cam-Chr2:3945034 8.60E-250 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0319 - - - 0.0