Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0326 ATGGATGAGAAGAGAGAAACCAAAGAGCCATCAAGCTCTAATCTCTCATCTTCTGCTCATCAAATCAGGCCTACAGAGAAGAGGACACCAATTGAAGTCTTTCAAGTGCCTGCAAGTTCTGGAGATGGCCATTCCAAGGGGGAGAGTGATGCGACTCATGAGCAGGATGAGGCAAAATCATCCCTCTCTTCCTTTCGTCCTGCTGCCAGCATGGAAGCATCCAGAAAGTGGATGGCATTTGAAAATGAAAACTTTAATATAACAGAAACGTACACAAAGAACTTCAGTGGTAGCTTTGGGTCATATTCTACTGATCTCTTGGAAACAAACATAACAAAAAGGCCTGCAGAGGAGAACAAGATTGATCGTTTATCATCGCTGCAACTGACATATGTGATCTCAGATGCAACAAAACCAGATTGCCCCATCATGTTTGCCAGCAATAGGTTCTTGGTTATGACTGGCTATACACTGGAGGAGGTCATTGGAAGGAACTGCCGGTTTCTTCAAGGACCAGAAACAGATAAGAATGAAGTCGCCAAAATACGAGATGCAATTAGAAAGGGGAATAGTTACTGTGGCAAGCTCTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACTGTTGGGCCTGTCAAAGATTCCCATGGCAACATCATCAAATTTATTGGAATGCAGGTTGAGATCGCCAAAAACACAGAAGAAAAAGAGAGAACCATGAAGTCCATGTCCATTACAGAGCTCCAAGCTGTGAAAAGTCTAAGATCTCACATTCAGTCAAAAAGGCATGATGCTGATACAAAGCACGAAGACCAAGAAATGACTGATGCTGATTATGCTCTGTACAAGGCTCTGGATATTGATGAGAATATTAGCACATCTGATAACCAAAAGGCTCGGTTCAAAGAAAGGACTCTAGGTTCTGCAGTAGAACGTGAAGAAAAGACAGTTGTTGAGGCATCTGTTTTCAATCCCAGGGATGGTGATTGTGTTGCTAAAAGAGAAAGGGACATATGTCAAGGAATTGAGTTGGCTACCACATTGGAACGGATTGAGAAGATATTTTTTATCACTAACCCAAGGCTTCCTGATAATCCTATTATATTCGCATCTCATAGGTTTCTTGATTCTACAGAATACTCATGTGAAGAAATTCTGGGGAGAAACTTTTGGTTTCTTCAGGGACCTGAAACAGATCAAGCAACTGTCTCAAAGATAAACAATGCAATTGAAGAGCAGAGAGAAATCACTCTTCAGATAATCAACTATACAAAGAGTGGAAAAAAGTTCTCGAATGTTTTCCACTTGCAACCCATGTGGGATCAAAAGAAGGGGGAGCTTCAATATTTCATTGCGGCACAACTTCATCTAAAACCTTCAAGAGGCTGGCTTTTAGATCAAACGGAGCATGAAAGTGCTAAGCTGGCCAAAGCTGTAGCTGAGAATGTTGACAAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAAACCAAAGAACTTCTGGGCAATCTACTGTCAGCCAGTCTTGCCAAGGCCTCACAAGAAGTACAGTCCTTCCTGGATAGCCATACAAAAGATTACCAGTCATGGTGAAAAGATTGGACTCCATCATTTTAAGCCAATAAGACCTCTGGGTTTTGGAGACATTGGCAGTGTTCATCTCGTACAACTAAACGGAACAGGTGAACTCTTTGCTATGAAGGCTATAGAAAAGTCAGTAATATTAAATCGAAACAAGGTTCATCGAGCATGCATGGAAAGGGAAATCATATCACTTCTGGATCATCCTTTCATGCCAACACTATACTCTTCATTTCAGACGCCTACGCACATTTTTCTTATTATGGACTTCTGCCCCGGTGGAGAGTTATTTACATTTCTTGACAAGCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTAGGTTCTATGCTGCAGAAGTTGTCATTGCTTTGGAGTATCTTCACTGTTTAGGTATTATCTACAGGGACCTAAAACCTGAAAATATTCTACTCCAGAAAGATGGACATATCATCCTCACTGATTTTGATTTATCGTTTAAGACGCCTAGCATACAAACCATAGAATCTTCAACCCCAAGAAAGAAGACATGTAGGCATAAATCACTGCCGATGGTCGTCGTTGAACCTATGGTAGAACTGAATTCATTCATTGGAACTGAAGAGTACATTGCCCCAGAGATCATAATGGGTGCAGGCCATGGTAGTTCTATTGACTGGTGGACTCTAGGTATCTTATTGTATGAAATGCTCTATGGTCGCACTCCCTTCAAAGGCAAAAACAGGAATAAAACTTTTGCCAATATTTTGTTCAAGGACTTGACCTTCCCCATTAGTATTCAGGCAAGTCTTGCAGCAAAACAACTGATTGATGCACTACTACAGAGAGACCCTGCACGTCGTCTAGGATCGAGGACCGGTGCTGATGAAATCAAACGACATCCATTTTTCCGTCAAATAAATTGGCCTAAAATTCGAACCATGGAGTCGCGCGCGGGTGAGGATGTTAGTGGTGTCGGTGGTGGGTTGAAGGTAGAGGAGTCGCCACTGGTGGGGAAGCCGGAAGTGGAGTCGGTCAATTTTTTGCCGGAGTCTCGAATTTGA 2631 42.27 MDEKRETKEPSSSNLSSSAHQIRPTEKRTPIEVFQVPASSGDGHSKGESDATHEQDEAKSSLSSFRPAASMEASRKWMAFENENFNITETYTKNFSGSFGSYSTDLLETNITKRPAEENKIDRLSSLQLTYVISDATKPDCPIMFASNRFLVMTGYTLEEVIGRNCRFLQGPETDKNEVAKIRDAIRKGNSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGNIIKFIGMQVEIAKNTEEKERTMKSMSITELQAVKSLRSHIQSKRHDADTKHEDQEMTDADYALYKALDIDENISTSDNQKARFKERTLGSAVEREEKTVVEASVFNPRDGDCVAKRERDICQGIELATTLERIEKIFFITNPRLPDNPIIFASHRFLDSTEYSCEEILGRNFWFLQGPETDQATVSKINNAIEEQREITLQIINYTKSGKKFSNVFHLQPMWDQKKGELQYFIAAQLHLKPSRGWLLDQTEHESAKLAKAVAENVDKAVRELPDANLKPKNFWAIYCQPVLPRPHKKYSPSWIAIQKITSHGEKIGLHHFKPIRPLGFGDIGSVHLVQLNGTGELFAMKAIEKSVILNRNKVHRACMEREIISLLDHPFMPTLYSSFQTPTHIFLIMDFCPGGELFTFLDKQPMKMFKEEAARFYAAEVVIALEYLHCLGIIYRDLKPENILLQKDGHIILTDFDLSFKTPSIQTIESSTPRKKTCRHKSLPMVVVEPMVELNSFIGTEEYIAPEIIMGAGHGSSIDWWTLGILLYEMLYGRTPFKGKNRNKTFANILFKDLTFPISIQASLAAKQLIDALLQRDPARRLGSRTGADEIKRHPFFRQINWPKIRTMESRAGEDVSGVGGGLKVEESPLVGKPEVESVNFLPESRI 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3996590 4008806 + CaPI482276_02g003260.1 Cam02g0326 120068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0326 876 Gene3D Phosphorylase Kinase; domain 1 540 624 - -
Cam02g0326 876 Gene3D Transferase(Phosphotransferase) domain 1 625 838 - -
Cam02g0326 876 CDD STKc_phototropin_like 539 838 - -
Cam02g0326 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0326 876 Pfam PAS domain 137 232 IPR000014 -
Cam02g0326 876 Pfam PAS domain 365 455 IPR000014 -
Cam02g0326 876 ProSiteProfiles Protein kinase domain profile. 541 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0326 876 SUPERFAMILY PYP-like sensor domain (PAS domain) 137 230 IPR035965 -
Cam02g0326 876 ProSiteProfiles PAS repeat profile. 116 189 IPR000014 -
Cam02g0326 876 NCBIfam PAS domain S-box protein 143 240 IPR000014 -
Cam02g0326 876 NCBIfam PAS domain S-box protein 369 454 IPR000014 -
Cam02g0326 876 FunFam Serine/threonine-protein kinase nrc-2 625 841 - -
Cam02g0326 876 SMART pac_2 193 235 IPR001610 -
Cam02g0326 876 SMART pac_2 420 463 IPR001610 -
Cam02g0326 876 SUPERFAMILY PYP-like sensor domain (PAS domain) 358 454 IPR035965 -
Cam02g0326 876 CDD PAS 357 452 IPR000014 -
Cam02g0326 876 Pfam Protein kinase domain 544 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0326 876 SMART pas_2 118 187 IPR000014 -
Cam02g0326 876 SMART pas_2 345 414 IPR000014 -
Cam02g0326 876 CDD PAS 143 232 IPR000014 -
Cam02g0326 876 MobiDBLite consensus disorder prediction 46 60 - -
Cam02g0326 876 Gene3D PAS domain 131 289 - -
Cam02g0326 876 ProSiteProfiles PAC domain profile. 190 244 IPR000700 -
Cam02g0326 876 Gene3D PAS domain 332 493 - -
Cam02g0326 876 SUPERFAMILY Protein kinase-like (PK-like) 517 837 IPR011009 -
Cam02g0326 876 PANTHER FLIPPASE KINASE 1-RELATED 488 839 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam02g0326 876 SMART serkin_6 541 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0326 876 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0326 Cam-Chr2:3996590 Cam10g1296 Cam-Chr10:26438098 4.60E-90 dispersed
Cam02g1111 Cam-Chr2:20543612 Cam02g0326 Cam-Chr2:3996590 4.50E-269 transposed
Cam02g2140 Cam-Chr2:34164485 Cam02g0326 Cam-Chr2:3996590 5.40E-228 transposed
Cam05g2350 Cam-Chr5:31573839 Cam02g0326 Cam-Chr2:3996590 8.50E-44 transposed
Cam06g1807 Cam-Chr6:29158078 Cam02g0326 Cam-Chr2:3996590 1.70E-57 transposed
Cam01g2175 Cam-Chr1:34435293 Cam02g0326 Cam-Chr2:3996590 4.40E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84943 PF00069 Pkinase 1.70E-62 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0326 K20715 - csv:101213364 1464.13