Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0333 ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCTCCTCTCGTTACGCCGATCAATTTCTCGGTTCAGAGCTCCAACTTCAAAATTTCTCACAAACCCATCTCGCCGATCCCAACAACTCGCCGGAAAGTCACCAGAAAAATCTCAATCCGGCCGATTCAACCACCCCCACTAGCGGCGGTTCGTCCACGCGCCGTTCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATTGTAACACGTGACAGCCCCAATGCTCTGAGATCGCACGTGCTGGAGGTCTCCGCCGGCTCCGATGTGGTCGAATCCGTCTCGAGTTACGCCACGCGCCGCCGCCACGGCGTTTGCATTCTCGCCGGCACCGGCGCCGTCACAAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCGGGAACTGTTATGACGCTTCATGGAACGTTTGAGATTGTGTCTCTGACTGGTACGGCGTTGCCACCGCCGGCGCCTCCGGGTGCCGGAGGGATAACTGTTTATTTGTCCGGCGGGCAAGGGCAGGTCGTCGGAGGAAGTGTTGTCGGGCCGTTGACGGCGTCAAGTCCCGTTGTATTGATGGTGGCGTCGTTTACTAATGCGGTGTATGATCGGCTGCCGCTGGACGAGGCGGAGCCGCCGGTGCAAGCTCAGCCATCGGCATCACCATCTTCAGATATTACAGGTGGAGGCGGGCAGCTTGGGGGCATCGGAAGCTTCAACCTGCCCGACGACAATTACGGTTGGAATGGCAATACATCGAGGCCTCCGACGACGCTGTGA 801 60.17 MSDLNSAVHGGSSRYADQFLGSELQLQNFSQTHLADPNNSPESHQKNLNPADSTTPTSGGSSTRRSRGRPAGSKNKPKPPVIVTRDSPNALRSHVLEVSAGSDVVESVSSYATRRRHGVCILAGTGAVTNVNLRQPAAPSGTVMTLHGTFEIVSLTGTALPPPAPPGAGGITVYLSGGQGQVVGGSVVGPLTASSPVVLMVASFTNAVYDRLPLDEAEPPVQAQPSASPSSDITGGGGQLGGIGSFNLPDDNYGWNGNTSRPPTTL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4065479 4067763 - CaPI482276_02g003330.1 Cam02g0333 120075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0333 266 CDD DUF296 92 158 IPR005175 -
Cam02g0333 266 FunFam AT-hook motif nuclear-localized protein 91 220 - -
Cam02g0333 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
Cam02g0333 266 MobiDBLite consensus disorder prediction 27 89 - -
Cam02g0333 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 206 IPR005175 -
Cam02g0333 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 235 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Cam02g0333 266 MobiDBLite consensus disorder prediction 27 68 - -
Cam02g0333 266 MobiDBLite consensus disorder prediction 217 266 - -
Cam02g0333 266 ProSiteProfiles PPC domain profile profile. 88 226 IPR005175 -
Cam02g0333 266 MobiDBLite consensus disorder prediction 251 266 - -
Cam02g0333 266 Gene3D - 91 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0333 Cam-Chr2:4065479 Cam02g1751 Cam-Chr2:30595749 1.10E-58 dispersed
Cam02g0333 Cam-Chr2:4065479 Cam06g0196 Cam-Chr6:3789490 8.30E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0333 - - - 0.0