Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g0362 | ATGAATGCACATATCAACTCCGTCTCCATTGCCAGTAGTAGCAGCTCTCCTCTCGATCTCGCCATTCCTTTTGAACTTCAAATGATTGAAACTACAACGTCTCTCGACTCCAATCGCCGCCGTCCTCGCAAGAAACGGTCAAGAATAGAAAAAGACTCCACCGTCACCACTGCCGCCGTCTCTTCCAAGGCTAAGTATAGCAAGAAACCCGATCCTAATGCACCCAAGATCACTCCTCCATGTACTGAGTGTGGGAAGAGATTTTGGTCAGATAAAGCGCTTTTCGGTCACATGAGGTGTCATCCTGAACGTCAATGGCGGGGAATTAATCCGCCTCTTAATTTCCGTCGTTCGATTTCTGTTTCTCCTTTTAGCCCTAATATCGCTACTGATTTAGAAGACTCTTCGTTTACTGAAGAAGATCAAGACATTGCTAATTGCTTGCTAATGCTTGCGAATAGCCCTAATTCGATTTCTAGGGTTTCCGATTGTCGATTTGAATGCTCGAGTTGTAAGAAAGTGTTTGGATCGCATCAAGCGCTTGGTGGACATAGGGCAAGTCATAAGAATGTGAGAGGCTGTTTCGCTATCGCAAAGAGCGATGAAGAAACAGAAGATGAAATTACTCTGTTTGGCCATGACAGGAGTATCAATCTGGAGAATAGAATGTCGATGATGATTTTAGGAACAGCAGAGCATAAATGTAGTGGCCACAAGAGATTCCATTGGGAGAATAATGCAGCTGCAGAAGAAGGTTTTGTTAATTTGGACTTGAACATGCCTGCTCCTCTTGAAGATGGTTCATCTTCTTCATATTCTTCAAGCCTCACTCTGGATCTCAGGTTGGGCCTTTGA | 855 | 44.21 | MNAHINSVSIASSSSSPLDLAIPFELQMIETTTSLDSNRRRPRKKRSRIEKDSTVTTAAVSSKAKYSKKPDPNAPKITPPCTECGKRFWSDKALFGHMRCHPERQWRGINPPLNFRRSISVSPFSPNIATDLEDSSFTEEDQDIANCLLMLANSPNSISRVSDCRFECSSCKKVFGSHQALGGHRASHKNVRGCFAIAKSDEETEDEITLFGHDRSINLENRMSMMILGTAEHKCSGHKRFHWENNAAAEEGFVNLDLNMPAPLEDGSSSSYSSSLTLDLRLGL | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4361008 | 4361862 | - | CaPI482276_02g003620.1 | Cam02g0362 | 120104 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g0362 | 284 | MobiDBLite | consensus disorder prediction | 34 | 74 | - | - | |
Cam02g0362 | 284 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 188 | IPR036236 | - | |
Cam02g0362 | 284 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 33 | 282 | - | - | |
Cam02g0362 | 284 | Gene3D | Classic Zinc Finger | 39 | 193 | - | - | |
Cam02g0362 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 81 | 101 | IPR013087 | - | |
Cam02g0362 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 166 | 193 | IPR013087 | - | |
Cam02g0362 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 168 | 188 | IPR013087 | - | |
Cam02g0362 | 284 | SMART | c2h2final6 | 166 | 188 | IPR013087 | - | |
Cam02g0362 | 284 | SMART | c2h2final6 | 79 | 101 | IPR013087 | - | |
Cam02g0362 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 79 | 106 | IPR013087 | - | |
Cam02g0362 | 284 | Pfam | C2H2-type zinc finger | 165 | 189 | IPR013087 | - | |
Cam02g0362 | 284 | Pfam | C2H2-type zinc finger | 81 | 103 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0362 | Cam-Chr2:4361008 | Cam05g0031 | Cam-Chr5:841727 | 2.30E-14 | dispersed | |
Cam02g1027 | Cam-Chr2:15679929 | Cam02g0362 | Cam-Chr2:4361008 | 1.70E-25 | transposed | |
Cam10g0368 | Cam-Chr10:5940293 | Cam02g0362 | Cam-Chr2:4361008 | 3.70E-08 | transposed | |
Cam01g2140 | Cam-Chr1:34216660 | Cam02g0362 | Cam-Chr2:4361008 | 5.80E-08 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51437 | PF13912 | zf-C2H2_6 | 6.90E-10 | CL0361 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g0362 | - | - | - | 0.0 |