Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0362 ATGAATGCACATATCAACTCCGTCTCCATTGCCAGTAGTAGCAGCTCTCCTCTCGATCTCGCCATTCCTTTTGAACTTCAAATGATTGAAACTACAACGTCTCTCGACTCCAATCGCCGCCGTCCTCGCAAGAAACGGTCAAGAATAGAAAAAGACTCCACCGTCACCACTGCCGCCGTCTCTTCCAAGGCTAAGTATAGCAAGAAACCCGATCCTAATGCACCCAAGATCACTCCTCCATGTACTGAGTGTGGGAAGAGATTTTGGTCAGATAAAGCGCTTTTCGGTCACATGAGGTGTCATCCTGAACGTCAATGGCGGGGAATTAATCCGCCTCTTAATTTCCGTCGTTCGATTTCTGTTTCTCCTTTTAGCCCTAATATCGCTACTGATTTAGAAGACTCTTCGTTTACTGAAGAAGATCAAGACATTGCTAATTGCTTGCTAATGCTTGCGAATAGCCCTAATTCGATTTCTAGGGTTTCCGATTGTCGATTTGAATGCTCGAGTTGTAAGAAAGTGTTTGGATCGCATCAAGCGCTTGGTGGACATAGGGCAAGTCATAAGAATGTGAGAGGCTGTTTCGCTATCGCAAAGAGCGATGAAGAAACAGAAGATGAAATTACTCTGTTTGGCCATGACAGGAGTATCAATCTGGAGAATAGAATGTCGATGATGATTTTAGGAACAGCAGAGCATAAATGTAGTGGCCACAAGAGATTCCATTGGGAGAATAATGCAGCTGCAGAAGAAGGTTTTGTTAATTTGGACTTGAACATGCCTGCTCCTCTTGAAGATGGTTCATCTTCTTCATATTCTTCAAGCCTCACTCTGGATCTCAGGTTGGGCCTTTGA 855 44.21 MNAHINSVSIASSSSSPLDLAIPFELQMIETTTSLDSNRRRPRKKRSRIEKDSTVTTAAVSSKAKYSKKPDPNAPKITPPCTECGKRFWSDKALFGHMRCHPERQWRGINPPLNFRRSISVSPFSPNIATDLEDSSFTEEDQDIANCLLMLANSPNSISRVSDCRFECSSCKKVFGSHQALGGHRASHKNVRGCFAIAKSDEETEDEITLFGHDRSINLENRMSMMILGTAEHKCSGHKRFHWENNAAAEEGFVNLDLNMPAPLEDGSSSSYSSSLTLDLRLGL 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4361008 4361862 - CaPI482276_02g003620.1 Cam02g0362 120104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0362 284 MobiDBLite consensus disorder prediction 34 74 - -
Cam02g0362 284 SUPERFAMILY beta-beta-alpha zinc fingers 80 188 IPR036236 -
Cam02g0362 284 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 33 282 - -
Cam02g0362 284 Gene3D Classic Zinc Finger 39 193 - -
Cam02g0362 284 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Cam02g0362 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 193 IPR013087 -
Cam02g0362 284 ProSitePatterns Zinc finger C2H2 type domain signature. 168 188 IPR013087 -
Cam02g0362 284 SMART c2h2final6 166 188 IPR013087 -
Cam02g0362 284 SMART c2h2final6 79 101 IPR013087 -
Cam02g0362 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Cam02g0362 284 Pfam C2H2-type zinc finger 165 189 IPR013087 -
Cam02g0362 284 Pfam C2H2-type zinc finger 81 103 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0362 Cam-Chr2:4361008 Cam05g0031 Cam-Chr5:841727 2.30E-14 dispersed
Cam02g1027 Cam-Chr2:15679929 Cam02g0362 Cam-Chr2:4361008 1.70E-25 transposed
Cam10g0368 Cam-Chr10:5940293 Cam02g0362 Cam-Chr2:4361008 3.70E-08 transposed
Cam01g2140 Cam-Chr1:34216660 Cam02g0362 Cam-Chr2:4361008 5.80E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51437 PF13912 zf-C2H2_6 6.90E-10 CL0361 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0362 - - - 0.0