Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0416 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCAGCCGAGCTCCGATCGGTATGTGGCCGGGGAAATCAGGGGGCAGCAGGATGGGCTGTTATGGTACAAAGATAGTGGACAACACTTGAATGGAGAGTTTTCAATGTCTGTGATTCAGGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGCAGTTTGAGCTTACACGAGTCTGGCCCCAAAGGAACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTATTCCAGCATCTCAAGAGATTTACTTCTGAGCAAGATCTAATGTCTGCGGATGTAATACGCAAGGCGTTCCAAGCGACAGAAGAGGGGTTCTTTTCAATAGTTCGAAGTCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTGTCAACAGAACACAATGTTTCTAACGAGTCGGTGAGGCAAGAGCTGCAGTCTTTGCACCCTGATGACTCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCCATAGGCGATGTGTACTTGAAAAAAGCTGAGTTCAATAAAGAACCATTGTATGCAAAGTTTCGAGTTCAAAAACCCTTCAAAAAGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGATCCAGTTGAAGCCAGATGATCAATTTGTTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAATCAGGAAGCAGTCGATATAGTTCATAGCCACTCTCAAAATGGAAGTGCAAGAAGACTGGTCAGAGCTGCTCTTCAAGTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGGCCGTGGCGTTCGTCGCCATTTCCACGACGACATCACTGTGGTGGTTGTGTTTCTTGATACCAATATGCTCTTCAGAGCCAGCTCCATGAAGAGCTTGAGTGTCTCACTACGAGGCGGTGGAGTCAACCGGCTTCCTAACTCTTTATCCCCTGTCACTACGCCCGTGTAG 1173 45.44 MLSELMNFLRACFQPSSDRYVAGEIRGQQDGLLWYKDSGQHLNGEFSMSVIQANNLLEDQSQIESGSLSLHESGPKGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDLMSADVIRKAFQATEEGFFSIVRSQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDSQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYAKFRVQKPFKKPFLSSEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHSQNGSARRLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNMLFRASSMKSLSVSLRGGGVNRLPNSLSPVTTPV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4896996 4900283 - CaPI482276_02g004160.1 Cam02g0416 120158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0416 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Cam02g0416 390 FunFam Phosphatase 2C family protein 34 363 - -
Cam02g0416 390 Gene3D - 25 361 IPR036457 -
Cam02g0416 390 ProSiteProfiles PPM-type phosphatase domain profile. 42 353 IPR001932 -
Cam02g0416 390 SMART PP2C_4 37 351 IPR001932 -
Cam02g0416 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Cam02g0416 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g0416 390 Pfam Protein phosphatase 2C 70 321 IPR001932 -
Cam02g0416 390 CDD PP2Cc 46 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2107 Cam-Chr1:34044203 Cam02g0416 Cam-Chr2:4896996 5.40E-163 dispersed
Cam02g0416 Cam-Chr2:4896996 Cam10g0048 Cam-Chr10:2101953 2.00E-154 dispersed
Cam02g0416 Cam-Chr2:4896996 Cam02g1259 Cam-Chr2:24827992 1.00E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0416 - - - 0.0