Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0444 ATGAGCATCCACCACCGCCCTCCGCCGTCCTCCTCCGCCCTCAAATGGCTCGGCTTAGTTACCGCCGTCTGGGTCCAATCCATCTCCGGCAACAATTACACCTTCTCCAACTACTCCGCCGCCCTCAAATCCCTCATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAGGCCTTTGGCCTCCTCGCCGGCCTCGCCTCCGACCGCTTCTCCACCTCCCTCCTCCTCCTCATCGGCTCCATCGAAGGCCTTATTGGCTACGGCGCTCAATGGCTCGTCGTCAGTCAAAAAATCAAACCACTCCCTTACTGGCAGATGTGTATATTTTTGTGTATGGGAGGGAATAGTACCACTTGGATGAACACCGGCGTGCTTGTTACTTGCCTGAGAAACTTCCGGCGAAACAGAGGCACTGTTTCCGGCATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTCACCGATCTTTGTACCGCTCTTTTCTCCGATAATCCCTCTTCTTTTCTCGCCCTCCTTTCCCTCACCCCCTTCGCCGTTTGTCTCACTGCTGTTCTCTTCCTCCGTGAAATCCCCTGTTCCGCCGATAACGAAACAGAGGACTCGAGATACTTCTGGGTACTCAACGCCGTTTCCGTCGCTGTCGCTGTCATTCTCTTAGCCTTCGATTCGATCCCAAATCCCACCTTGTCCGTATCGAGAATTTTCTCCATGGTGTTGCTGATTTTGCTAGCCTCACCTCTGGTAATCCCACTCCACTCGTTTGTCAAAAACAGGGGTCGGTCCGGTGAAGTTGCAGAGGCGTTGCTGGCGGACGAGAGTGCGGTGGAGGGTGCGGAAGAGGGGAAGCCGGTGATCGGAGAAGATCATACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTCTGTTTGGGTCGTTTCTGTGTGGAGTGGGAACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGATACGACGAGGTTTCGATTTTCATATCTCTGATGAGTATTTGGGGGTTTTTTGGCCGGATTTTATCGGGATCGGTGTCGGAGCATTTCATCAAGAAAGCAGGAATGCCAAGGCCACTATGGAACGCAGCTTCTCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATGCCTGGATCCTTATACATCGGCTCGGTTGTTGTCGGGATTTGCTATGGCGTCCGTCTCGCCATCACCGTCCCAATGGCCTCTGAAGTCTTCGGTCTCAAAAACTACGGCATGATCTACAATGTTCTAATCCTCAACCTCCCACTCGGTTCGTTCCTCTTCTCAGGACTGCTTGCCGGGATCCTCTATGATTGGGAGGCGACAACGATGAAGGAAGGCGGCAATATGTGTGTGGGAGGGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGTGGTTGGGTTTGCCATGGACTTGTTTTTGGCCTTTAGAACCAACAGGTTGTATTCCAAAATGAGGGGTCTAAAGGGATAA 1548 51.55 MSIHHRPPPSSSALKWLGLVTAVWVQSISGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLAGLASDRFSTSLLLLIGSIEGLIGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRRNRGTVSGILKGYIALSTAIFTDLCTALFSDNPSSFLALLSLTPFAVCLTAVLFLREIPCSADNETEDSRYFWVLNAVSVAVAVILLAFDSIPNPTLSVSRIFSMVLLILLASPLVIPLHSFVKNRGRSGEVAEALLADESAVEGAEEGKPVIGEDHTIVEAMKTVEFWILFGSFLCGVGTGLAVMNNMGQIGLALGYDEVSIFISLMSIWGFFGRILSGSVSEHFIKKAGMPRPLWNAASQILMALGYILLAIAMPGSLYIGSVVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDWEATTMKEGGNMCVGGHCYRLVFVVMACSCVVGFAMDLFLAFRTNRLYSKMRGLKG 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5164402 5168492 + CaPI482276_02g004440.1 Cam02g0444 120186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0444 515 Pfam Nodulin-like 15 259 IPR010658 -
Cam02g0444 515 CDD MFS_Mch1p_like 14 492 - -
Cam02g0444 515 SUPERFAMILY MFS general substrate transporter 8 504 IPR036259 -
Cam02g0444 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 509 - GO:0016020(PANTHER)
Cam02g0444 515 Gene3D MFS general substrate transporter like domains 301 506 IPR036259 -
Cam02g0444 515 Gene3D MFS general substrate transporter like domains 13 208 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0444 Cam-Chr2:5164402 Cam07g1327 Cam-Chr7:27616830 7.60E-93 dispersed
Cam02g0444 Cam-Chr2:5164402 Cam02g1231 Cam-Chr2:24431361 3.40E-210 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0444 - - - 0.0