Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0467 ATGTGGCTACAAAAAGGAAACAGTGTTAATGGCGTCAAAAAGGTAGCTGCAGCAGGCGGAGGGGGAAATGGGTTGGTTGCTATTGGTATAGACAGGGAAAAAGGAAGCCAAAATGCTCTCAGATGGGCCGCCGACCATTTGCTCGGAAAGGGTCAAACTGTGATTTTAATCCATGTTGTTCAGAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTGTTTGTAGTGGCGATGGTAATTTCACAGCTGATTCCCCTCGTAAGCAGCAGCTCGAGATGCAGACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGTCTTGATGTTATATTGGAAGACACCGATATAGTTAAAGCATTAATCGAATACGTATCGTACGCTGCAATCGATAACTTGGTGCTCGGGGCTCCTTCGAAACATGGATTTATTAGGTTTAAAACGTCGAGCATGGGCAGTAGTGTGTCAAAAGGAGCACCGGATTTCTGCAATGTATATGTCATCTCGAAGGGGAAGGTGTCATCAGTGAGAAATGCATCTCGCTCACCTCCCTTTACTTCCCCTCTACAAGACCATTTACGGAAGATTTCTAAGCCGATCGCAAAGGGAGCAATCACTCCTCGACATAAGTTTAATTTAAGAGACAGGACATCATTCAAGCCTCGCAGCTTTCAAGATGAATCAATCAAGTCACCTTTCTCTCATGGAGGAGAGAGAACTTCTATCTCAAAATGTAGTGGAGGATTCTCTGAGTCAGAATCTGACATATCCTTTGTAAGCTCTGGCAGACCAAGCACGGATCGTACTTCTTCTGTTGCATTTGACTACTCTGATTCGGCTCCCCCACGATTTTCAACCAGCTCAGAGCATAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCTCAGTAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCAACGGAACTAAATAATTGGAGACGTGAAGAAGAACAAAAACTAGAAGAGGCACGACTTGCACAAGAGGCAGCAATGGCTATTGCAGAGCAGGAGCGAGTGAGATGCAGAGCGGCAATGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTCGAATCACATAAAAGAGAAAATCTAGAGATTAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATCTTGCACAGAACGACATCAGATACAGGAGATATTCAATTGAGGAGGTTGAATCGGCGACGGAACATTTTGCACAATCTCGGAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCAGTTGCAGTCAAGGTTTTGCGTCCTGATGCATCTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCTGAATATGGCATTCTAGTGTATGAATACATGTCCAACGGAAGTTTGGAGGATCGACTCTTTCGAAAGGGGAACACTCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCCGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAACTATGTTTGCAAGATAAGTGATGTTGGTTTGGCTAGACTTGTACCTGCTGTGGCCGAAAATGTAACACAATGCTACATGACTTCGGCTGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCTCCCATGGGGTTGGCTCACCATGTTGCTCGCTCTATCGAGAAGGGGACTTTTCGGGAGCTTCTGGACCCAGCTGTGGTTGATTGGCCAGTGGAACAAGCACTTTGCTTTGCAAAATTAGCACTTCAATGTGCAGAACTTAGGCGAAAAGACAGACCAGATCTCGGCAAGGTTGTGTTGCCAGAACTTAACAAATTGAGAGAATTTGGTGAAGACAAAATGGAGTTCATGGTGTCAAGGGATAGTAGTGGATCTTTGAGCGGTTTTAGCCATGCCTCAATGGAGCAGGACGTAATGAGCGACCCACAATTAACGATGGCTTCAGAAAGTTCCAAGAGCCAATCTAGTGAATCATCACAGAAAGCCTTATCCAAAGGCTTCTATCATCAGTTTCTCAGAAGGTTGGATTTCCCACAACTCCATTCATCATCTATAAATACATATTTGATTGAGTTCAGAAACAACACAAGTCTTCATTCTTCTCAAGAGAAGTTGTCTTCTCATCTCAAGCTTCTTCGACGACATTCCACCTCAACAAAGGAAGGAGTTGCAGTAGTTCCAAAGGGCTACTGCGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTATCATCCCTATTGTTCATGCTAAGCCAAGTCTTCGACGATCCACATCGTCGGGAAGTAGAGCCTCTCCAAAGTCTCTTGATGTTCCAAAAGGATACTTTACGGTCTATGTCGGAGGACAGAAGAAGCATTTTGTCATCCCGCTATCTTACTTGAACCAACCTTTGTTTCAAGATTTGTTGAGTCAAGCCGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATACCCTGCAATGAAGATACTTTTGTTAATCTTATTCATAGTTTAAATGACTCATATGAGTCGTGA 2916 43.86 MWLQKGNSVNGVKKVAAAGGGGNGLVAIGIDREKGSQNALRWAADHLLGKGQTVILIHVVQRPSSAAASLIGEAIVCSGDGNFTADSPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDIVKALIEYVSYAAIDNLVLGAPSKHGFIRFKTSSMGSSVSKGAPDFCNVYVISKGKVSSVRNASRSPPFTSPLQDHLRKISKPIAKGAITPRHKFNLRDRTSFKPRSFQDESIKSPFSHGGERTSISKCSGGFSESESDISFVSSGRPSTDRTSSVAFDYSDSAPPRFSTSSEHSFASLPFKPKWTDLSNLNDFSSVSDESCRTSCSWSSQNLDEAELEMRRLKLELKQTMEMYSTACKEALTAKQKATELNNWRREEEQKLEEARLAQEAAMAIAEQERVRCRAAMEAADAAKRIAEFESHKRENLEIKALKEAEEMQRALKNLAQNDIRYRRYSIEEVESATEHFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDASQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVCKISDVGLARLVPAVAENVTQCYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHHVARSIEKGTFRELLDPAVVDWPVEQALCFAKLALQCAELRRKDRPDLGKVVLPELNKLREFGEDKMEFMVSRDSSGSLSGFSHASMEQDVMSDPQLTMASESSKSQSSESSQKALSKGFYHQFLRRLDFPQLHSSSINTYLIEFRNNTSLHSSQEKLSSHLKLLRRHSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPIVHAKPSLRRSTSSGSRASPKSLDVPKGYFTVYVGGQKKHFVIPLSYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCNEDTFVNLIHSLNDSYES 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5336053 5345471 + CaPI482276_02g004670.1 Cam02g0467 120209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0467 971 MobiDBLite consensus disorder prediction 234 258 - -
Cam02g0467 971 Gene3D Phosphorylase Kinase; domain 1 438 543 - -
Cam02g0467 971 Pfam Protein kinase domain 472 723 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0467 971 Coils Coil 368 403 - -
Cam02g0467 971 Gene3D Transferase(Phosphotransferase) domain 1 544 753 - -
Cam02g0467 971 FunFam U-box domain-containing protein 51 544 743 - -
Cam02g0467 971 Pfam Auxin responsive protein 890 964 IPR003676 GO:0009733(InterPro)
Cam02g0467 971 SMART serkin_6 471 733 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0467 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g0467 971 MobiDBLite consensus disorder prediction 770 789 - -
Cam02g0467 971 Coils Coil 337 357 - -
Cam02g0467 971 SUPERFAMILY Protein kinase-like (PK-like) 454 729 IPR011009 -
Cam02g0467 971 PANTHER OS02G0152300 PROTEIN 26 788 IPR051348 -
Cam02g0467 971 Gene3D HUPs 25 176 IPR014729 -
Cam02g0467 971 ProSiteProfiles Protein kinase domain profile. 471 747 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0467 971 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 176 - -
Cam02g0467 971 Pfam Universal stress protein family 27 168 IPR006016 -
Cam02g0467 971 CDD STK_N 30 179 - -
Cam02g0467 971 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Cam02g0467 971 Coils Coil 428 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0467 Cam-Chr2:5336053 Cam05g2835 Cam-Chr5:35422930 4.40E-243 dispersed
Cam02g0475 Cam-Chr2:5370001 Cam02g0467 Cam-Chr2:5336053 5.10E-35 dispersed
Cam11g0398 Cam-Chr11:5373036 Cam02g0467 Cam-Chr2:5336053 1.30E-22 dispersed
Cam11g0399 Cam-Chr11:5377067 Cam02g0467 Cam-Chr2:5336053 2.00E-23 dispersed
Cam11g0404 Cam-Chr11:5424191 Cam02g0467 Cam-Chr2:5336053 1.10E-10 dispersed
Cam02g0466 Cam-Chr2:5328513 Cam02g0467 Cam-Chr2:5336053 7.40E-22 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84949 PF00069 Pkinase 3.80E-41 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0467 - - - 0.0