Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0659 ATGACCCTTTCACCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCTCCGCTCCAGCTCCCTCTCTCTGTTCCTTCCTCCCACCTTCGAAACCCTAAATCCACATCTCTCCTTGAAAATTTCGCACCCTTTTTCGCCTTGGATTGTTCGGCTATCGTTGTTTTTTTTCTGGGTAAGATTGTCTTCTTTGTTCTGGATTCTAATGGGTTCATTTCAGTATTTTACTTATTCACTCTTCATATCATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCACTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGCCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTTCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGAACTAATGATAGAGATGATGTATTTTCTGATAGTGAGTCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCGGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAAGAAAAGAGATGCAAAGTTGAAAAGTTCGTGGAATGGCAGACGCGGCATCGGCAATATAATTGCGAAGGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTCTACTCCCAACGATTTCTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTAAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTGGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATATTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCATATGCTACGATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCCGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA 2973 44.0 MTLSPIPSKPRRFSVSPLQLPLSVPSSHLRNPKSTSLLENFAPFFALDCSAIVVFFLGKIVFFVLDSNGFISVFYLFTLHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPLQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGTNDRDDVFSDSESEGGSSKSKKEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYEKKRDAKLKSSWNGRRGIGNIIAKEKFLGIQFLRPLLPTISQFLFCGLCSKYSILVGSLQKRGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFHAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPPPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7629061 7641107 + CaPI482276_02g006590.1 Cam02g0659 120401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0659 990 MobiDBLite consensus disorder prediction 87 128 - -
Cam02g0659 990 MobiDBLite consensus disorder prediction 538 571 - -
Cam02g0659 990 Pfam PTEN2, C2 domain 413 539 - -
Cam02g0659 990 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 239 407 IPR029021 -
Cam02g0659 990 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 308 360 - -
Cam02g0659 990 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 756 875 IPR035892 -
Cam02g0659 990 MobiDBLite consensus disorder prediction 953 990 - -
Cam02g0659 990 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 211 408 - -
Cam02g0659 990 MobiDBLite consensus disorder prediction 882 907 - -
Cam02g0659 990 ProSiteProfiles Phosphatase tensin-type domain profile. 226 405 IPR029023 -
Cam02g0659 990 ProSitePatterns Tyrosine specific protein phosphatases active site. 342 352 IPR016130 GO:0016311(InterPro)
Cam02g0659 990 ProSiteProfiles C2 tensin-type domain profile. 412 539 IPR014020 -
Cam02g0659 990 ProSiteProfiles C2 domain profile. 741 855 IPR000008 -
Cam02g0659 990 CDD C2 757 854 - -
Cam02g0659 990 SMART PTEN_C2_2 410 538 IPR014020 -
Cam02g0659 990 Gene3D Protein tyrosine phosphatase superfamily 211 408 IPR029021 -
Cam02g0659 990 MobiDBLite consensus disorder prediction 572 594 - -
Cam02g0659 990 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 213 631 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Cam02g0659 990 MobiDBLite consensus disorder prediction 595 635 - -
Cam02g0659 990 MobiDBLite consensus disorder prediction 886 907 - -
Cam02g0659 990 Pfam C2 domain 757 852 IPR000008 -
Cam02g0659 990 MobiDBLite consensus disorder prediction 535 671 - -
Cam02g0659 990 SMART C2_3c 756 853 IPR000008 -
Cam02g0659 990 MobiDBLite consensus disorder prediction 173 193 - -
Cam02g0659 990 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 340 379 IPR000387 GO:0016311(InterPro)
Cam02g0659 990 Gene3D C2 domain 755 875 IPR035892 -
Cam02g0659 990 CDD PTP_PTEN 236 401 IPR045101 GO:0016791(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g1514 Cam-Chr10:28889371 Cam02g0659 Cam-Chr2:7629061 9.30E-41 transposed
Cam01g1749 Cam-Chr1:31090180 Cam02g0659 Cam-Chr2:7629061 2.20E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0659 K01110 - csv:101222304 1129.01