Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0660 ATGGCTTTGCACTCAAATAAACTCAGAACCCAACGCCTCCATAACTCTCTCTTCTTCTTCGACTTCTTCCACTGCACTGAACAACAACACCTTCAAACAGAGCATCCCATTTTCCTCAACAATGGCGGCACCAACAACTTCCCCTTTTTCCAAGAAACAACCCATTTCCATATTTACGAAGACGAGGAGCTCAATCATTTGTTGTCCAAAGAAAAAGACCAGAATCTCCAAGCCGGTGCCGTTTTGAAAACCTTGGTTCAAACAGATAATGCTTTGTCTCTCGCTAGAACAGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCAATTAATTACCTCGATAGAATCCTCTCTGGCCCCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAAGTCGAAGAAATTCGTGTCCCTCTTCTTCTAGATCTCCAGGTGGAAGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTATCACAAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGTTGTGAGCGTCTTCTCCTCTCTCTTGTCTCTGATTCGAGGTCGGTGGGGATTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGAGCGTTGTTGAAGAGATGGGAAGCTGTAACCCATTGGAGGAGTTTCAGGATCAGCTTCTTAATGCCCTCAAAATAAATAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCCAAAGGATCAGGGAAAAGGAAGCATGTGGAGGAGGAAGCAGAATCAGAAGCAGAAGCAGAAGCAGAATCATCAGAAGCAGAAACAGAGGAAGAAGCAGAAGCAGGGAGTCCAAATGGAGTAATGGAGGCTAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGAAATGGGGTCGATTGTGTCAGAGTACACACATTTTTCTTCTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGA 1128 43.88 MALHSNKLRTQRLHNSLFFFDFFHCTEQQHLQTEHPIFLNNGGTNNFPFFQETTHFHIYEDEELNHLLSKEKDQNLQAGAVLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIITKGLGMKNQYIQREFLRRCERLLLSLVSDSRSVGILPSVMAVSAMVSVVEEMGSCNPLEEFQDQLLNALKINKGRVKECCKVIMEAKAKGSGKRKHVEEEAESEAEAEAESSEAETEEEAEAGSPNGVMEANFSCESSNDSWEMGSIVSEYTHFSSSSSSSKRIRPTR 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7659345 7661771 + CaPI482276_02g006600.1 Cam02g0660 120402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0660 375 CDD CYCLIN_AtCycD-like_rpt2 198 290 - -
Cam02g0660 375 MobiDBLite consensus disorder prediction 298 347 - -
Cam02g0660 375 MobiDBLite consensus disorder prediction 310 327 - -
Cam02g0660 375 ProSitePatterns Cyclins signature. 96 127 IPR048258 -
Cam02g0660 375 PANTHER CYCLINS 59 260 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cam02g0660 375 SUPERFAMILY Cyclin-like 53 196 IPR036915 -
Cam02g0660 375 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Cam02g0660 375 FunFam D6-type cyclin 79 196 - -
Cam02g0660 375 SMART cyclin_7 101 189 IPR013763 -
Cam02g0660 375 Gene3D - 65 288 - -
Cam02g0660 375 Pfam Cyclin, N-terminal domain 67 195 IPR006671 -
Cam02g0660 375 SMART Cyclin_C_2 198 322 IPR004367 -
Cam02g0660 375 Gene3D - 77 196 - -
Cam02g0660 375 Coils Coil 302 324 - -
Cam02g0660 375 Pfam Cyclin, C-terminal domain 198 315 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0660 Cam-Chr2:7659345 Cam05g2226 Cam-Chr5:30530614 2.00E-58 dispersed
Cam01g1752 Cam-Chr1:31117588 Cam02g0660 Cam-Chr2:7659345 7.50E-57 wgd
Cam02g0660 Cam-Chr2:7659345 Cam05g1186 Cam-Chr5:11144878 2.10E-68 wgd
Cam02g0660 Cam-Chr2:7659345 Cam08g2089 Cam-Chr8:26428121 3.60E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0660 K14505 - csv:101222066 555.058