Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0668 ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATAACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAAGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCGGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGAAGAAGCTCTGGACCATCTCGGGGCCGACGACTACCTCGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA 1068 46.44 MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNNKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7811473 7814130 - CaPI482276_02g006680.1 Cam02g0668 120410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0668 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cam02g0668 355 Gene3D - 164 320 - -
Cam02g0668 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cam02g0668 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Cam02g0668 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cam02g0668 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cam02g0668 355 Pfam Alcohol dehydrogenase GroES-like domain 34 151 IPR013154 -
Cam02g0668 355 Gene3D - 13 350 - -
Cam02g0668 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cam02g0668 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cam02g0668 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cam02g0668 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0668 Cam-Chr2:7811473 Cam05g1718 Cam-Chr5:25667786 9.30E-98 dispersed
Cam08g1417 Cam-Chr8:20399621 Cam02g0668 Cam-Chr2:7811473 1.30E-12 transposed
Cam02g0668 Cam-Chr2:7811473 Cam05g1195 Cam-Chr5:11232228 5.10E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0668 K00083 - csv:101214622 637.106