Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0694 ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTACTTGGCGAGATCACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAAGAGGAATTACCTGAAGGAAGGTCGGCTGACCGTTCGGAGAAATCTGGCTCTGCATTTAGCATTTATAACCATCTTCGATCTCTGGAGATGGAATTACACGTGAAGTTACTGTCCAACAACATTGAAAAGGCTTACAATAGTGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTGTCGGACACCCTATATCTCACCATATCACATATTGACAGATACCTATCCTGGCATGCTGTTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGACGCATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCAAATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATATACAAAAGTTGCTTTAGAAAATTGGAAGCAGGCTCAAGATTTGCAATTTGAGTTATTGAGTTGTTATCTCGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACATATCTTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTGGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCACCCTCAGAAATTCCTGCATATTATTTTGAGGACATTGATCAGCAATCATTCAACGGGTTCTTAAGAACTTAA 1092 42.67 MDPPEYHKPSVRTSKKRDSEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGRSADRSEKSGSAFSIYNHLRSLEMELHVKLLSNNIEKAYNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAVDRSKLQLLGVCCMLIASTHEEISPPHVEDFCYITDNTYTKEQVLNMEREVRKFLTCEGAPTIKVFLRIYTKVALENWKQAQDLQFELLSCYLAELSLLDHRCVHILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQSFNGFLRT 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8189765 8192909 - CaPI482276_02g006940.1 Cam02g0694 120436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0694 363 MobiDBLite consensus disorder prediction 1 31 - -
Cam02g0694 363 MobiDBLite consensus disorder prediction 48 77 - -
Cam02g0694 363 PANTHER CYCLINS 59 329 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cam02g0694 363 SUPERFAMILY Cyclin-like 84 212 IPR036915 -
Cam02g0694 363 FunFam Cyclin A1 202 337 - -
Cam02g0694 363 SMART Cyclin_C_2 217 341 IPR004367 -
Cam02g0694 363 Pfam Cyclin, C-terminal domain 217 340 IPR004367 -
Cam02g0694 363 MobiDBLite consensus disorder prediction 55 75 - -
Cam02g0694 363 Pfam Cyclin, N-terminal domain 107 211 IPR006671 -
Cam02g0694 363 Gene3D - 84 337 - -
Cam02g0694 363 Gene3D - 97 215 - -
Cam02g0694 363 PIRSF Cyclin_A_B_D_E 2 348 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cam02g0694 363 MobiDBLite consensus disorder prediction 1 25 - -
Cam02g0694 363 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 289 363 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Cam02g0694 363 SMART cyclin_7 221 310 IPR013763 -
Cam02g0694 363 SMART cyclin_7 125 209 IPR013763 -
Cam02g0694 363 SUPERFAMILY Cyclin-like 217 342 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0694 Cam-Chr2:8189765 Cam05g2238 Cam-Chr5:30609286 1.20E-84 dispersed
Cam02g0694 Cam-Chr2:8189765 Cam08g2100 Cam-Chr8:26488282 5.80E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0694 K06627 - csv:101213896 621.313