Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0702 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTGCTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGTGAAATGAGATACTCCGACTTAAAGAAGATCGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCGAATCGAGCAAAGAACACGGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACTATGAAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.61 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNYEEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8315160 8317257 - CaPI482276_02g007020.1 Cam02g0702 120444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0702 379 Gene3D - 25 349 IPR036457 -
Cam02g0702 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Cam02g0702 379 PANTHER PROTEIN PHOSPHATASE 29 336 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g0702 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cam02g0702 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cam02g0702 379 CDD PP2Cc 42 337 IPR001932 -
Cam02g0702 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Cam02g0702 379 SMART PP2C_4 25 335 IPR001932 -
Cam02g0702 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0702 Cam-Chr2:8315160 Cam10g1717 Cam-Chr10:31207299 8.60E-118 dispersed
Cam02g0702 Cam-Chr2:8315160 Cam02g1259 Cam-Chr2:24827992 1.50E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0702 - - - 0.0