Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0728 ATGCGGGGACAACATTCTCACCCACTGAAGTCGGGTCTAGCCGGACCCGATGAGGAAAACGAACCAGTTCGCTCGTATCTCCCTGGAATGAACGTCCCGTTAGGCGCCGGAATTCGGAAGAAGGGAACTGGAGTCCGACCATGGCTACTACTGGACTCCACCGGCGGAGCTCAGGTAGTTGAGGCCGGAAAACATGTGATTATGCGGCGGACCGGCCTGCCGGCGCGTGACCTTCGGATTCTCGATCCGTTGCTCTCGTACCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTAATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTAGAGGAGCTTCAGAGACGAGTATTGCGGCACCATCAAGCCACTAAGGCTTCTCAGGAGGGCGTTGGTGATGATTCTAATTGGAGAAATCTATATGACCTGGAGGAGCCTCGTTCAAGGACTCAAAGTCCTCCTAATTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAACATGAAACAAAGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAAAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGAAATGGAAGATGACGATCAGCAGTTTGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGACGGTGGTGGAATTTCTGCTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGGACCCGGACAAGCACTACCCATAGCGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTTTTGGAGGCATACTTTGTGCAAATTGATGGTACACTAAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTCGTCGTCAGCGCTTTTGTCGTGGTGGCAGGTATCTTCGGGATGAACATCCATATTGAACTGTTTGAACCTGAAAAAGCAGGCATGCCGGAGTTCCTATGGACTGTTGGTGGTGGTGCTACAGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTCGAGTAG 1488 47.58 MRGQHSHPLKSGLAGPDEENEPVRSYLPGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHVIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKASQEGVGDDSNWRNLYDLEEPRSRTQSPPNSYQGFPQAEEEEGKENMKQSLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDEMEDDDQQFGKDDSIPAEISLDGGGISANYEGNMDASQDHLFGASNVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8800409 8805043 - CaPI482276_02g007280.1 Cam02g0728 120470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0728 495 Coils Coil 211 231 - -
Cam02g0728 495 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 36 493 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cam02g0728 495 MobiDBLite consensus disorder prediction 162 192 - -
Cam02g0728 495 FunFam Magnesium transporter MRS2-1 36 119 - -
Cam02g0728 495 Gene3D Magnesium transport protein CorA, transmembrane region 181 423 - -
Cam02g0728 495 Gene3D - 37 119 - -
Cam02g0728 495 Pfam Magnesium transporter MRS2-like 373 418 - -
Cam02g0728 495 Pfam Magnesium transporter MRS2-like 188 294 - -
Cam02g0728 495 Pfam Magnesium transporter MRS2-like 53 137 - -
Cam02g0728 495 CDD Mrs2_Mfm1p-like 48 493 IPR039204 -
Cam02g0728 495 MobiDBLite consensus disorder prediction 1 25 - -
Cam02g0728 495 MobiDBLite consensus disorder prediction 293 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0728 Cam-Chr2:8800409 Cam10g1389 Cam-Chr10:27538192 7.60E-90 dispersed
Cam02g0728 Cam-Chr2:8800409 Cam07g0060 Cam-Chr7:1741241 5.80E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0728 - - - 0.0