Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0763 ATGGCATTTACTAACTTTCTCTCCACATTTTGTTTTGTGGGACTAGCTCTAATTCTAGCTTCAATATCTCCCACGGTTGCGGAAAGCAGCCCCCAGGACTTCGTTGATGCCCACAATGCCATCCGTGCCGAGTACGGCGTCGGACCGGTCACTTGGAACAAAACCTTGGCTGAGTATGCTAAAAATTATGCCGAAACTAAGATCGCTACTTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTTGAAACAACAACAGCAGAATTGACAGTGAACTATTGGGCTAGTGAGAAGAAATTTTACGATCACGAATCAAACAAGTGCGTCAAGGAAGAGTGCGGCCATTTCCTTCAAGTCGTGTGGAAGGACACGAAAATGATTGGTTGCGCTGAAGTTAAGTGCAACAACAACTATATTTTCACCATTTGTAACTATTATCCTCCAGGAGGCTACCCTGACCAATTTCCTTATTAA 492 44.31 MAFTNFLSTFCFVGLALILASISPTVAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHESNKCVKEECGHFLQVVWKDTKMIGCAEVKCNNNYIFTICNYYPPGGYPDQFPY 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9161043 9161534 + CaPI482276_02g007630.1 Cam02g0763 120505

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0763 163 Gene3D CAP 25 163 IPR035940 -
Cam02g0763 163 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 32 157 IPR001283 GO:0005615(PANTHER)
Cam02g0763 163 FunFam CAP, cysteine-rich secretory protein, antigen 5 28 163 - -
Cam02g0763 163 Pfam Cysteine-rich secretory protein family 35 151 IPR014044 -
Cam02g0763 163 CDD CAP_PR-1 31 163 - -
Cam02g0763 163 SUPERFAMILY PR-1-like 29 163 IPR035940 -
Cam02g0763 163 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Cam02g0763 163 PRINTS Allergen V5/Tpx-1 family signature 50 68 IPR001283 -
Cam02g0763 163 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Cam02g0763 163 PRINTS Allergen V5/Tpx-1 family signature 146 159 IPR001283 -
Cam02g0763 163 SMART SCP_3 29 159 IPR014044 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0763 K13449 - - csv:101210746 288.115
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0761 Cam-Chr2:9135733 Cam02g0763 Cam-Chr2:9161043 1.00E-96 dispersed
Cam02g0763 Cam-Chr2:9161043 Cam10g0975 Cam-Chr10:21824959 1.10E-37 dispersed
Cam02g0762 Cam-Chr2:9152726 Cam02g0763 Cam-Chr2:9161043 5.00E-54 tandem
Cam02g0763 Cam-Chr2:9161043 Cam02g0764 Cam-Chr2:9221564 2.20E-54 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g802 . . Bda06g01145 . . . . . Cmo19g00540 . . . . . . Cpe04g00339 Cpe15g00419 . . . . . . . Cla02g00713 Cam02g0763 Cec02g0761 Cco02g0787 Clacu02g0754 Cmu02g0748 Cre02g1065 . . . . Lsi03g00627 Csa07g00657 . Cme01g00145 . . . . . . . . Sed07g1155 . . Cma11g01688 . . . . . Bhi11g01091 Tan01g0594 Cmetu07g1308 . . . . . . . . . . . Lsi03g00997 . Chy01g00154 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004442 0 2 0 0 0 2 0 2 2 1 1 2 4 1 2 3 2 0 2 2 1 0 0 1 1 1 8 1 2 0 43