Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0780 ATGGACACTCTCTTTGTCCCCATATCCTTCTCCGAACCTCCTCGTCCTTCACTCACCCGCAACACCAACGCCGGTGCTCAATCGAGGATTGGACCTGTTTCCCGCTTCTCGCCGCGTTCTTCTCTAATTCGGCTCAAGCGCTTTCCCATTCCCTTTAAGAAGCTTTCCTCTCCTCGCTTCGGTCACTTCCGTTGCGCCGCCGACGCCTCCAGTCACCGACACGGTCACCATCACGGCCATCATCACCACCACCATGGCTGCCAGCACCATTGCAGTAGTGATGGTGATGGAGTGGAGCTGACTGGGGCTCAGAAGGCGTTTGTTCGATTTGCCGAAGCTATTAGGTGGACGGACTTGGCGAATTTTTTGAGGGAGCATCTACATTTGTGTTGCGGTTCTGCTGCTTTGTTTGTGACTGCAGCTGCGTGCCCTTATTTGGTGCCAAAACCTGCTGTGAAGCCTCTACAGAATGTTTTCATTGCAGTTGCTTTCCCTTTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGGAAAGTAAACATCCATGTACTAATGGCTCTTGCAGCCTTTGCATCAATTTTTATGGGGAACCCCTTGGAAGGAGGACTACTTCTTGTGATGTTTAATATGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGATTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTTGATGTGAATGATTATAACCTTCCCGATACTTCAGATCTGGAGCATAGAAGGGTGCCAGTGCGTGATGTTGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAAGTTTATCAAGGCTGTGCTACGATCACTGTTGAGCACTTGACAGGAGAAGTTAAACCATTGCAAATTAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACCTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGAGGTGGCTCGATGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTCTTATCCGTAGCGGTTGCCCTCATTGGACCATTATTGTTCAAGTGGCCATTTATATGCACACCAGGTTTCAGAGGATCGGTTTATAGAGCACTTGGACTCATGGTAGCCGCATCACCATGTGCACTGGCAGCAGCACCTTTGGCATATGCTATCGCAATAAGTTCCTGTGCAAGAAAGGGGATACTCCTGAAAGGTGGACACGTCCTTGATGCTATGGCTTCTTGTCACACTGTTGCATTTGATAAAACGGGAACATTGACTACAGGAGGACTTGTGTTTAAAGCCATAGAACCCATTTATGGGCATAAGATTGGAGGGGATAAATCACATTTTGCTTCCTGTTGCATACCGAGCTGCGAAAAAGAAGCCCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTAGTAGATCATAGTGTGGGGAAAGACCTTCCTTCTATTTCTGTTGAAAGTTTTGAATATTTCCCTGGAAGAGGTCTCATTGCAACTCTGCATGGCATTAAGTCAGGAATTGGAGGTAAATTGCGGAAAGCATCTCTTGGTTCTGTGGATTTCATCACTTCCTTCTGCAAATCCGAAAATGAATCAAGGAAGATCAAGGACGCAGTTAGAGCATCATCATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTAATTCACCTTGAGGATCAACCACGACCTGGAGTCTTAGATGCCATTGCAGAACTACAAGATCAGGGAAAACTCCGAGTTATGATGCTAACAGGTGATCATGATTCAAGTGCATGGAAAGTTGCGAATGCTGTAGGCATAAATGAAGTGTACTACAGTCTTAAGCCAGAGGACAAACTTGCTCACGTGAAGGAAATTTCAAGGGAGATGGGGGGTGGTCTGATCATGGTAGGCGAAGGTATAAACGATGCACCTGCACTTGCTGCTGCTACTGTGGGAATAGTTCTTGCCCATCGTGCAAGCGCTACTGCTACAGCTGTTGCAGACGTCCTGCTTCTTCAGGACAGTATTTCCGGCGTTCCATTCTGCATTGCCAAATCTCGTCAGACCACTTCACTGGTCAAGCAAAATGTGACCCTTGCCTTGTCATCTATCCTTCTAGCCTCTCTCCCATCCGTTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTGGTTTGTCTGAACTCCGTACGTGCTCTAAATCAGCCCTCGTGGTCATGGAAACAAGATTTTCAAAATCTGATACATGACGTCAGATCTAAACTCAACACGACACCCAAAACTAGCTCTGGTACCATCCAAACTGCAACTTCATAG 2472 46.44 MDTLFVPISFSEPPRPSLTRNTNAGAQSRIGPVSRFSPRSSLIRLKRFPIPFKKLSSPRFGHFRCAADASSHRHGHHHGHHHHHHGCQHHCSSDGDGVELTGAQKAFVRFAEAIRWTDLANFLREHLHLCCGSAALFVTAAACPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNMAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDYNLPDTSDLEHRRVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLQIKVGERVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSHFASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESFEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRKIKDAVRASSYGSEFVHAALSVDQKVTLIHLEDQPRPGVLDAIAELQDQGKLRVMMLTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLVKQNVTLALSSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNQPSWSWKQDFQNLIHDVRSKLNTTPKTSSGTIQTATS 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9657014 9665789 + CaPI482276_02g007800.1 Cam02g0780 120522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0780 823 SUPERFAMILY Calcium ATPase, transduction domain A 260 345 IPR008250 -
Cam02g0780 823 Pfam E1-E2 ATPase 259 432 - -
Cam02g0780 823 SUPERFAMILY HAD-like 450 781 IPR036412 -
Cam02g0780 823 NCBIfam HAD-IC family P-type ATPase 261 473 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam02g0780 823 NCBIfam HAD-IC family P-type ATPase 585 761 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam02g0780 823 CDD P-type_ATPase_HM 128 783 - -
Cam02g0780 823 Gene3D - 225 350 - -
Cam02g0780 823 Gene3D - 445 732 IPR023214 -
Cam02g0780 823 Gene3D - 463 612 IPR023299 GO:0000166(InterPro)
Cam02g0780 823 SFLD p-type atpase 434 734 IPR044492 -
Cam02g0780 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 62 815 IPR051949 -
Cam02g0780 823 NCBIfam heavy metal translocating P-type ATPase 186 783 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cam02g0780 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 188 764 IPR023298 -
Cam02g0780 823 MobiDBLite consensus disorder prediction 14 31 - -
Cam02g0780 823 MobiDBLite consensus disorder prediction 11 31 - -
Cam02g0780 823 PRINTS P-type cation-transporting ATPase superfamily signature 627 637 - -
Cam02g0780 823 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
Cam02g0780 823 PRINTS P-type cation-transporting ATPase superfamily signature 705 717 - -
Cam02g0780 823 PRINTS P-type cation-transporting ATPase superfamily signature 604 615 - -
Cam02g0780 823 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Cam02g0780 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Cam02g0780 823 Pfam haloacid dehalogenase-like hydrolase 450 694 - -
Cam02g0780 823 SFLD C1.7: P-type atpase like 434 734 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0780 Cam-Chr2:9657014 Cam02g0840 Cam-Chr2:10890245 5.50E-194 dispersed
Cam02g0780 Cam-Chr2:9657014 Cam06g1500 Cam-Chr6:26459592 1.60E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0780 K01534 - csv:101221102 1477.23