Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0781 ATGATTTCCATTGCCCAAAATCCCAATGTCTCCTCCGAACTCTCCTCCTCTCCCCCGCCTTCCACCGCCACAACCTATACTTTCCGATCCAAATTTCCCGATATTACTATCCCCGACCACCTCCCTCTTCACAGTTACTGCTTTCAGAACCTCTCTGAAGTTTCCCACCGCCCCTGTTTGATCCTCGGCTCCACTGGCAAATCCTATTCCTACTCCGACACCCACCTCTTCTCCCTCAAAGCCGCCGCCACTTTCTCTAAACTTGGAGTTAAGAAAGGCGATGTTATTATGATTCTTCTCCACAACTCTCCCGAATTTGTTTTCTCTTTTATGGCTTCCTCCATGCTCGGCGCCGTCGCCACCACCGCAAATCCGTACTACACGGCGGCCGAGATTTCCAAGCAGTTGAAGGCCTCCGGTGCCAAATTCGTGGTTACTTACTCCCAATGCGTCGACAAGCTCAAAGAATCCGGCGAACATCTCACCATTGTCACCGTCGATGACCCGCCAGAGAATTGTCTGAGCTTCTCGATGGTGTACGACGCCGATGTGAATGACGTACCCTCCGTGGAGATTGATACAAACGACGCCGTTGCGCTACCGTTCTCCTCTGGCACGACCGGGCTCCCGAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTGGATGGAGAGAATCCAAACTTGTATTTAAGAAGAAACGACGTAGTGCTATGCGTGTTACCAATGTTCCACATATTCTCGTTGAGTAGCATAGTTTTGATATCAATTAGGTCAGGGGCAGCGCTGCTTTTGATGGAGAAGTTCGAGATAGAGTCATTGCTAAGACTAATAGAGAGGCACGAGGTGACAGTGGCGGCGGTGGTGCCGCCGCTTGTGGTAGCGCTAGTGAAGAACCCGAGGGTGGCGGATTTTGACCTGAGCTCGATTAGATTGGTCCTTTCAGGAGCGGCGCCGCTGCGGAAGGAGCTGGAGGAGGCTCTCATGGAGAGGCTTCCTCAAGCCATTTTTGGTCAGGGTTATGGGATGACGGAAGCGGGTCCCGTGCTGAGCATGTGCTCGGCTTTTGCAAAGGAGCCAGTGATGCCAACAAAATCAGGTTCCTGTGGCAGAGTAGTGAGAAACTCGGAGCTCAAAGTCATTGACCCACAAACCGGCGACTCCCTCACTTATAATCAACCTGGAGAGATTTGTGTTCGAGGTCCTCAAGTAATGAAAGGATATTTGAACGACCCGGTGTCCACGTCCTTGACTGTCGACGTGGAGGGTTGGCTTCATACGGGTGACATTGGTTACATTGACGATGAAGATGACATTTTTATTGTTGACAGAGTCAAAGAGATCATTAAATTTAAAGGTTTTCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTTGTAACCCATCCATCTATTGTGGATGCCGCTGTTGTCCCGCAAAATGATGATGTTGCTGGTGAAGTTCCAGTGGCTTTCGTAGTTCCATCAACTCATGATGAACTTACTGAGGACGCAGTAAAAGACTTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCAGAAAGTGTATTTTGTGCAAACAATTCCAAAATCACCCTCTGGAAAGATTTTGAGAAAGGAACTCAAAGCCAAGCTCTCAGTGTCACCTGGATTTTAG 1674 49.4 MISIAQNPNVSSELSSSPPPSTATTYTFRSKFPDITIPDHLPLHSYCFQNLSEVSHRPCLILGSTGKSYSYSDTHLFSLKAAATFSKLGVKKGDVIMILLHNSPEFVFSFMASSMLGAVATTANPYYTAAEISKQLKASGAKFVVTYSQCVDKLKESGEHLTIVTVDDPPENCLSFSMVYDADVNDVPSVEIDTNDAVALPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLRRNDVVLCVLPMFHIFSLSSIVLISIRSGAALLLMEKFEIESLLRLIERHEVTVAAVVPPLVVALVKNPRVADFDLSSIRLVLSGAAPLRKELEEALMERLPQAIFGQGYGMTEAGPVLSMCSAFAKEPVMPTKSGSCGRVVRNSELKVIDPQTGDSLTYNQPGEICVRGPQVMKGYLNDPVSTSLTVDVEGWLHTGDIGYIDDEDDIFIVDRVKEIIKFKGFQVAPAELEALLVTHPSIVDAAVVPQNDDVAGEVPVAFVVPSTHDELTEDAVKDFIAKQVVFYKRLQKVYFVQTIPKSPSGKILRKELKAKLSVSPGF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9702703 9708567 + CaPI482276_02g007810.1 Cam02g0781 120523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0781 557 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cam02g0781 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 23 548 - GO:0016207(PANTHER)|GO:0016405(PANTHER)
Cam02g0781 557 MobiDBLite consensus disorder prediction 1 22 - -
Cam02g0781 557 Gene3D - 452 553 IPR045851 -
Cam02g0781 557 SUPERFAMILY Acetyl-CoA synthetase-like 24 550 - -
Cam02g0781 557 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Cam02g0781 557 CDD 4CL 37 547 - -
Cam02g0781 557 Gene3D - 21 451 IPR042099 -
Cam02g0781 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 29 452 - -
Cam02g0781 557 Pfam AMP-binding enzyme 56 415 IPR000873 -
Cam02g0781 557 FunFam 4-coumarate--CoA ligase 2 453 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0781 Cam-Chr2:9702703 Cam09g0353 Cam-Chr9:3875424 3.00E-183 dispersed
Cam02g0781 Cam-Chr2:9702703 Cam10g1398 Cam-Chr10:27656377 7.30E-190 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0781 K01904 - csv:101221344 927.546