Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0832 ATGACCTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCTTCTTGCAATGGACTCAATTTCGATGGGATTCTCTTGCTTTCCTTTAAGTATGCCGTTTTGGATGATCCTCTCTTTGTTCTTCAGAATTGGAATTACTCCGACGACACCCCCTGTTCATGGCGAGGAGTCGTATGTTCCGCCGATGGTTCCGGTGGCTCTAGAGTTACAGGTTTGTCTCTTCCGAGTTCTCAGCTTATGGGCTCTGTTTCTTCTGATTTGGGTCTGATTCAAAATCTTCAATCGGTTGATCTTTCTAACAATTCCTTTAATGGGTCTCTTCCCCGGTCTCTGTTCAACGCCACCATGCTCCGGTTTCTTGATTTGTCCGATAATTTGATTTCCGGCGAGGTTCCTGGGCCAGAGGGTGACCTTAGGAATTTGCAAGTTCTTAACCTTTCCGGTAATGCTCTGTTCGGGAAGTTTCCGAGTGATCTCGTGAATTTGAGTAATCTCACGGTTGTGTCTCTGAAGAACAATTACATTACCGGTGAAATTCCCGGTGGGTTTAAAACGGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGTCTGATTTTGGTGGCGACAGTTTACATTACTTTAACATCTCATACAACAGACTTTCCGGCGAAATTCCGCCGGATTTCGCCCACAAAATTCCGGCTAATGCCATAATTGATCTCTCCTTCAACAACCTCACCGGAGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCACCGGAAACCGCCAACTCTGCGGGGAGTTAACGAAAACCCCATGCCCAATTACGTCATCGCCATCGTCTCTCCCACCGGCCATCGCCGCCATTCCGCTAGACCCAAGTACTCCGGAAACGACCTCGCCGGAAAAGCAGAGCGAAACAGGGTTTAAACCGTCCACAATCGTGGCCATTGTACTGGGAGACGTCGTCGGATTGGCAATTCTGTGCCTCCTCTTCTTCTACGTCTTCCATTTGAAGAAAAAAAACAAAGCCGTCGAAACCCATTTGAAAAACGAACCCAATTTAGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCACGATGGTCCTGCCTCAGAAAAACAGGGGATCCAGAAGAGGCAAATTCCGATCAAGCGAGTGTGTTATCCTTCTCCGGCCATCGCGAGACGGCGGAGGAGGGTGCAGAAGAGAACAAGAGAGGAACATTAGTGACAGTAGACGGCGGAGAGAAGGAGCTGGAACTCGATACTCTACTGAAAGCATCGGCGTACATTCTGGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGCACGGCGTTTGCAGTGAGGAGAATCGGAGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAATCAGATTCGTGTTGTAGCTAAATTGGTTCACCCAAATTTGGTTCGTGTTCGTGGATTTTATTGGGGTGCTGATGAAAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCCAATGCTCGTTACAGGAAAATGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATTGCAAAAGGAGTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTCTCGGCTTCGATATGGAGCCCAAGATAGGCGATTTCGGCCTTGACAAGCTCTTCTTGGGTGATTCCAGCTATAAACCCGGCGGCTCCACTCGAAATTTCGGGAGTAAAAGGTCTACAGCGTCTCGGGATAGCTTCCAAGATTTTGTCACCGGACCTAGCCCTGGACCGAGCCCGAGCTCGATCAGTGGGGTGTCGCCGTATTTAGCACCGGAGTCGCTTCGGAGCTTGAAGCCCAACTCGAAATGGGATGTCTACTCTTTTGGTGTGATATTGCTTGAGTTACTAACCGGAAAGATTGTAGTGTTGGATGAGTTGGGGCAAGGGCTTGGGCTTGCCAGCGAGGACAAGAGTCGAACCTTAAGAATGGCCGACATGGCGATTCGAGCAGACGTGGAAGGTAGAGAAGAAGCATTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCATGTCAATGTCATCACACTATTATGGTCTCTAG 2247 48.06 MTFILLLLLLLLLQSSCNGLNFDGILLLSFKYAVLDDPLFVLQNWNYSDDTPCSWRGVVCSADGSGGSRVTGLSLPSSQLMGSVSSDLGLIQNLQSVDLSNNSFNGSLPRSLFNATMLRFLDLSDNLISGEVPGPEGDLRNLQVLNLSGNALFGKFPSDLVNLSNLTVVSLKNNYITGEIPGGFKTVEVLDLSSNLINGSLPSDFGGDSLHYFNISYNRLSGEIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDVVGLAILCLLFFYVFHLKKKNKAVETHLKNEPNLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHRETAEEGAEENKRGTLVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGADEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIVVLDELGQGLGLASEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTMSMSSHYYGL 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10691257 10693955 - CaPI482276_02g008320.1 Cam02g0832 120574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0832 748 ProSiteProfiles Protein kinase domain profile. 436 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0832 748 FunFam Leucine-rich repeat receptor-like protein kinase 20 182 - -
Cam02g0832 748 SUPERFAMILY Protein kinase-like (PK-like) 441 734 IPR011009 -
Cam02g0832 748 SUPERFAMILY L domain-like 29 271 - -
Cam02g0832 748 CDD STKc_IRAK 442 736 - -
Cam02g0832 748 Gene3D Ribonuclease Inhibitor 21 184 IPR032675 -
Cam02g0832 748 Gene3D Ribonuclease Inhibitor 185 280 IPR032675 -
Cam02g0832 748 Gene3D Transferase(Phosphotransferase) domain 1 512 744 - -
Cam02g0832 748 PANTHER OS05G0588300 PROTEIN 137 737 IPR050994 -
Cam02g0832 748 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Cam02g0832 748 Pfam Leucine Rich repeats (2 copies) 117 152 IPR025875 -
Cam02g0832 748 MobiDBLite consensus disorder prediction 291 312 - -
Cam02g0832 748 MobiDBLite consensus disorder prediction 382 415 - -
Cam02g0832 748 MobiDBLite consensus disorder prediction 298 312 - -
Cam02g0832 748 Pfam Protein kinase domain 442 731 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g0832 748 Gene3D Phosphorylase Kinase; domain 1 405 511 - -
Cam02g0832 748 Pfam Leucine Rich Repeat 209 229 IPR001611 GO:0005515(InterPro)
Cam02g0832 748 Pfam Leucine Rich Repeat 165 185 IPR001611 GO:0005515(InterPro)
Cam02g0832 748 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515(InterPro)
Cam02g0832 748 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Cam02g0832 748 MobiDBLite consensus disorder prediction 611 631 - -
Cam02g0832 748 FunFam Leucine-rich repeat receptor-like protein kinase 186 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0832 Cam-Chr2:10691257 Cam05g1190 Cam-Chr5:11186074 1.80E-151 dispersed
Cam02g0832 Cam-Chr2:10691257 Cam01g0603 Cam-Chr1:6519930 1.60E-75 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84955 PF00069 Pkinase 6.60E-30 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0832 - - - 0.0