Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam02g0854 | ATGGATCTTCTTTTGCTCTCTATTTCTCTAATCTCTCTAATCTCTCTATTCTCTCTTCTCCTTGCCTTCAACTTCTTCCAGCAACCTCATCACAAAAACCTCCCACCAACTCCATCTTTTTGTCTTCCATTAATAGGCCATCTCCATCTCCTCAAACATCCTGTCCATCAAACACTTCAAAGCCTCTCCCAAAAGCATGGCCATGTCTTTTCTCTCCGATTCGGCTCACGTCTTGTTGTAGTTGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAACGATGTGATTCTTGCCAATCGCCCATTGTTCAACAGTTCGAAGTACTTAACCTACAACTATACCAACTTAGCCATCTCTCCTTATGGAGAACATTGGCGAAACCTCCGCCGAATCAGCACCCTTGAGATTTTCTCCGCAAGTCGCCTTAATCTTTTCAGGGGAATTAGGGAAGATGAAGTCAAACGGTTGTTGTGTAAATTGTGGGATAAATATTCGTTTGAAGAGTTTAAGGTAGTGGAGATGGGGCCAATATTTATGGATCTTATGTTCAATATTGTTATGAGAATGATGGCGGGAAAGAAGTATTGTGGTGATGATTTGGAAGATGAGGAACGATCTAAGAAATTTAAAGAGATGGTGACACAAGTTCTTGCAATTAGTGCAATGGGAAATCCAGGAGATGTTATACCTTTATGGAATTGGATTGATCCAACTTGTTATGAGAAAAGGGTAAAAAAGCTTGCAAAGACATCAGATGAACTTCTTCAACAACTAATTGATGAGATTAGGAATCAAAATGATGGAGAAAACACCATGATTCAACATTTACTTGGTTTGCAGAATACCCAACCTGAATGTTATAGTGACCAAATTATCAAAGGCCTCCTACAAGTAGCATTTTTAGCAGGAATAGACACAATTGCAGTGACCTTAGAATGGGCACTATCTCAATTGCTCAATAATTCAGAGGTGTTGAAGAAAGCTAGAGATGAGATAGATAGTTCCATTGGGCAAGATCGTTTTGTTAACGAAGCTGATTTGTCGAGTTTGAGTTACTTGGAAGGAATAATCTCTGAGACCCTACGATTGAACCCAGCCGCTCCCCTTCTGCTGCCACATTGTGCCTCTGAAGACTGCAAAATAGGAGGCTACGATGTACCACGTGACACGATGGTATTAATCAATGCTTGGGCCATACACAGAGACTCAAGTCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGACATGAAAATGCAATTGGAGTTGATTTGTACAAACTATTACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAATGGGAATGGCACAACGTGTAATTGCATTGACTCTGGCGTCGTTGATTCAATGCTTTGAGTGGCAAAGACTCAGCAACTCATTGGTGGACATGACAGAAGGCCAAGGGCTCACTATGCCGAAAGCTCAACCATTGACAGCCAAGTGTAGACCTCGTTCAATCATGAAAAAACTATTGCCAATGAAACAATAA | 1518 | 41.17 | MDLLLLSISLISLISLFSLLLAFNFFQQPHHKNLPPTPSFCLPLIGHLHLLKHPVHQTLQSLSQKHGHVFSLRFGSRLVVVVSSSSLVQECFTKNDVILANRPLFNSSKYLTYNYTNLAISPYGEHWRNLRRISTLEIFSASRLNLFRGIREDEVKRLLCKLWDKYSFEEFKVVEMGPIFMDLMFNIVMRMMAGKKYCGDDLEDEERSKKFKEMVTQVLAISAMGNPGDVIPLWNWIDPTCYEKRVKKLAKTSDELLQQLIDEIRNQNDGENTMIQHLLGLQNTQPECYSDQIIKGLLQVAFLAGIDTIAVTLEWALSQLLNNSEVLKKARDEIDSSIGQDRFVNEADLSSLSYLEGIISETLRLNPAAPLLLPHCASEDCKIGGYDVPRDTMVLINAWAIHRDSSLWEDATSFKPERHENAIGVDLYKLLPFGLGRRACPGMGMAQRVIALTLASLIQCFEWQRLSNSLVDMTEGQGLTMPKAQPLTAKCRPRSIMKKLLPMKQ | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 11257366 | 11259522 | + | CaPI482276_02g008540.1 | Cam02g0854 | 120596 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam02g0854 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam02g0854 | 505 | CDD | CYP81 | 67 | 487 | - | - | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | Gene3D | Cytochrome P450 | 24 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | Pfam | Cytochrome P450 | 35 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | SUPERFAMILY | Cytochrome P450 | 35 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | FunFam | Cytochrome P450 family protein | 25 | 497 | - | - | |
| Cam02g0854 | 505 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam02g0854 | 505 | PANTHER | CYTOCHROME P450 82C3-RELATED | 18 | 494 | IPR050651 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam02g0850 | Cam-Chr2:11130197 | Cam02g0854 | Cam-Chr2:11257366 | 1.80E-200 | dispersed | |
| Cam02g0851 | Cam-Chr2:11170211 | Cam02g0854 | Cam-Chr2:11257366 | 5.50E-197 | dispersed | |
| Cam02g0854 | Cam-Chr2:11257366 | Cam06g0070 | Cam-Chr6:2576684 | 1.80E-150 | dispersed | |
| Cam02g0853 | Cam-Chr2:11191708 | Cam02g0854 | Cam-Chr2:11257366 | 7.80E-117 | tandem | |
| Cam02g0854 | Cam-Chr2:11257366 | Cam02g0855 | Cam-Chr2:11272123 | 4.70E-196 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam02g0854 | K13260 | - | csv:101205391 | 822.772 |