Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0859 ATGGTGATTCAGAGAGAAATGGAATTGAGAAGAGCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCCAGTTCAGAGGGCAGAAGGAAGACGGTCGAAATGGTTCTTGCCAATTCCGCCAATTGCCACTTCACATCCTCAAAGTTGGATTCAGATATGGGCCAGAAAGCATGCATGAGAGAATTAGCAGAGAAGGAATATGAAGCAGAAGAATTCGTTCCTTGCATTCATAAAAAAAACATGGGTAAAGATGCTATAAGAATTCTTCCAACTGACATGAAACATGACTTGTTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCAAGTTCTAGCTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTCAGTGGAGGGTCCGATAGTCGCATGAGACATCTAATTAGGGCATCACAAGATTCATCAGAACCACACCTTGCTGAAGCTCCAGCTCCATCTCCATCTCCATCTCCATCTCCTGAAGCAGAATCACCAGCAAGTTCTCCATTCCCGTCTCCCAGTCTTGCTCCAACGCCATCTCCAAGTTATGCCCCAACCAAGTCACCATATCGAAATCTCCGTCCACCTGTTGAGGCTCCAGCTCCGTCTGCAGAACCACTACCAGACGACACTGTTGTTTCAGATTTGCCTACACCTTCTGTAGTTCGCTCACCACCTCCTCCACGTGCTTCTCCCAAGTCTCGCCCTCCAAAGAAGCATGAAGAAGACCAGACAGCCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCTCTGCTTTTGTTTTGCTGTCGTAGAGGTGAGAAAAGTAAGGTAGATCCGAAGGATGGGCAAAAGGATGAGAGACCTCTCCTAAACATATCTTTGAGTGAATTATCAGCAGGTTCTTCACAGATGTCATACAGCCTTGGAAATCCAGCTACCAAAGAGGTAAATGCTGGTAATGGAACTAAACCACCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGATACCTCTATGGCTGAGGGTCCAACATCTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGAACAGATTCTCAACCTCCTCCAGCACCAGCACCAGAACCAGCACCAGAACCAGCACCAGCACCAGCACCAGCACCAGCACCGCCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCCCTGAAAGTTGGCCGACCCCCACCTGCACCACCGACGGCAATCCCTGGTAAATCTCAAGCAGCGCCTATGGGGCCACATCAACGTGGACCCAGTGGCTCAAGTATGGATGGGGATTCAGGAGGCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTCGCTAACCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAGTTCAATGAGGAGATGATGGAGTCATTGTTTGGATATACAGCAGTAGAAACCAACAAAGGCGACCGCAAGAAAGATTTAGCTTCAGACCCTTCAGCACAGTTCATTCAAATCATCGATGCTAAGAAGGCTCAAAACCTTTCAATTCTCCTACGAGCATTGAATGTAACAACAGCAGAAGTTTTGGATGCCCTTGAAGAAGGAAATCCTGATCTTCCAGCAGAGCTTCTGCAGACCTTGTTGAAGATGGCACCAACAACAGAAGAGGAACTGAAACTGAGATTATTTTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAGCGATTCCTCAAAGTGTTGGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTTTCAATGTCGGAAGACGTCACTAACATTAAGGAGTCATTCGCTACTCTAGAGGTCGCATGCAACAATCTTAGAAATAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGGACGTACCGTGGCGGTGCTCAGGCATTCAAGCTCGATACGCTTTTGAAACTAGCGGATGTTAAAGGAACCGATGGCAAGACTACACTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCATCCGAGCAGCCCGCTCCGACAGACAAAGCCGGAGTTCGTCTAGCATAATCTCCAGCGATACGATTTTCGAGGACTTCACCGACGATTCGACGGAACATTATCGGCAATTAGGGCTTCAGGTGGTTTCTAGTTTAAGCACGGAGCTCCAGGACGTTAAAAGAGCGGCTGCCATAGATGCGGAGGGGCTAACGACGACGATATCGAAACTTGGCCAGTCTCTGTTTAAAACCAAAGCATTCATAGACGCGGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCATTGTCGAAATTTTTGGAAGGAGCGGAAGCAGATATTTCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCATTGGTGAGGAGCACGGTGGATTACTTCCATGGACATTCTGGAAAGGAGGAAGGATTGAGATTGTTTACGATCGTACGGGACTTCTTGATTGTGTTGGACAAGACATGTAAACAGGTCAAAGAAGCAGCTGAGGCTGCGGCCAAGCAAGCGAAGAATTCCAAAAAAGAAACTGCGACATCGTCGGCTACTTACAAGCAGAATTCAGATCTAAGGCAGCGGCTATTTCCGGCAATTGCAGAACGACGGATAGGCGATGATTCAAGTTCTTCGGACGAGGACGACGATGGCGAGAGTTCATCTTCATCATCCTAG 2787 47.0 MVIQREMELRRAGYVVVFVTLLCALAIASSEGRRKTVEMVLANSANCHFTSSKLDSDMGQKACMRELAEKEYEAEEFVPCIHKKNMGKDAIRILPTDMKHDLLDCLRKKTMLTRGSEPSSSLFDRFSKPIELFFSGGSDSRMRHLIRASQDSSEPHLAEAPAPSPSPSPSPEAESPASSPFPSPSLAPTPSPSYAPTKSPYRNLRPPVEAPAPSAEPLPDDTVVSDLPTPSVVRSPPPPRASPKSRPPKKHEEDQTAIIAGIVAAGVGVVLVVALLLFCCRRGEKSKVDPKDGQKDERPLLNISLSELSAGSSQMSYSLGNPATKEVNAGNGTKPPSFVGNLSVNPENDTSMAEGPTSDGKSSAMPPLKPPPGRTDSQPPPAPAPEPAPEPAPAPAPAPAPPPPPAPRAPPPPPLKVGRPPPAPPTAIPGKSQAAPMGPHQRGPSGSSMDGDSGGQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVETNKGDRKKDLASDPSAQFIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGNPDLPAELLQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSIISSDTIFEDFTDDSTEHYRQLGLQVVSSLSTELQDVKRAAAIDAEGLTTTISKLGQSLFKTKAFIDAEMKSLDEDSKFHQSLSKFLEGAEADISWIAVEEKKIMALVRSTVDYFHGHSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNSKKETATSSATYKQNSDLRQRLFPAIAERRIGDDSSSSDEDDDGESSSSSS 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11321420 11324834 - CaPI482276_02g008590.1 Cam02g0859 120601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0859 928 MobiDBLite consensus disorder prediction 148 253 - -
Cam02g0859 928 SMART it6_source 450 872 IPR015425 -
Cam02g0859 928 MobiDBLite consensus disorder prediction 311 459 - -
Cam02g0859 928 MobiDBLite consensus disorder prediction 311 358 - -
Cam02g0859 928 PANTHER FORMIN-RELATED 111 917 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cam02g0859 928 Gene3D Formin, FH2 domain 458 897 IPR042201 -
Cam02g0859 928 MobiDBLite consensus disorder prediction 160 195 - -
Cam02g0859 928 MobiDBLite consensus disorder prediction 914 928 - -
Cam02g0859 928 ProSiteProfiles Formin homology-2 (FH2) domain profile. 450 883 IPR015425 -
Cam02g0859 928 MobiDBLite consensus disorder prediction 365 429 - -
Cam02g0859 928 MobiDBLite consensus disorder prediction 877 895 - -
Cam02g0859 928 Coils Coil 861 881 - -
Cam02g0859 928 Pfam Formin Homology 2 Domain 456 856 IPR015425 -
Cam02g0859 928 MobiDBLite consensus disorder prediction 872 928 - -
Cam02g0859 928 SUPERFAMILY Formin homology 2 domain (FH2 domain) 520 877 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0859 Cam-Chr2:11321420 Cam05g1653 Cam-Chr5:24377382 3.00E-156 dispersed
Cam02g0859 Cam-Chr2:11321420 Cam06g1735 Cam-Chr6:28639645 9.10E-28 transposed
Cam02g0859 Cam-Chr2:11321420 Cam04g1237 Cam-Chr4:26396716 9.10E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0859 K28090 - csv:101206094 1055.82