Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g0964 | ATGTTGAAAACATTGCAAATGACCCTCCCACTGTCGCTACGCGATTCTTTTAGCTCAGTGACTGGAGTGTGGTTCGATGGCTCTCGAGGAAAAAAACTCTGCGGTTCAGTGATTCTTAGCTTTGACAAGCAGATCATAGTGGTTTGGTGGACATTGTCGGAGAACTGCTCGGAGTTGGTCCTATTTTGGCTTAAAATCCTCTCCGATCTCCAGCTCTGTGAAAGCTTGAATCAGCCTGCAGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCAATTATAGGAAGAGTGGCGAAGGTGGCAATGGAAGCTGCAGTTTCGGATGTGAATGAAGATCCTTCTATTCTCAATGGAACAAAGCTGAATTTGGTCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGCTTTCCAGGTTCTTGAGAAAGATGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCATATGCTGCCACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTCTTCCTACGAACTACTCAGAGTGATGCCTACCAAATGACTGCTATGGCAGATTTAATTGACTTTTATGAGTGGAAGGAGGTGATCATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATATCCACTTTAACTGATGAGCTTGACAAAAGGATGTTTAAAATTTCTTACAAAATACCCTTACCTTCTCATTTTAATCCCAGTGAAATCACAGTCATGCTCAATAAATCCAAGTTGCTCGGTCCTCGTGTCTATGTTGTTCATGTCAATCCTGATCCTAGATTAAGTATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTACTACCTTAGATTCTGTTCTGCCTGTGCAACAAACCTCTATAGACATCCTTCAAGGCGTGGTTGTACTTCGTCAACATATTCCTGAATCCAACCAACAAACAACATTATGGTCTCGGTTAAGGAAGATGCTGCCAGAAGGCTCCAGAAATTCTTCGTTGAATGTCTATGCTCTTAGTGCCTATGATACGATTCAAGTAGCTGCACGTGCAATTGATAAGTTTCTAAATGAAGGTAGGAGCATTACCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGCCCTGGGGAAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAGGCAAACTTTACTGGTTTAAGTGGTCAGATTGAGTTTAATTCAGATCGGAACCTTGTCAATAGAGGCTATGAGGTGATCAATATTGATCAGACGGGACTGCGTAGAGTTGGTTATTGGTCCAATGTCACAGGCTTTACAATCCAATCCCCAGAAACTCTGAAGCAGAAACGACTTAGTTATTCCCACCTGAACCAGGCTCTTGGCAATGTTACCTGGCCTGGTGGAAAGACAGAAAGACCGCGTGGATGGGTGATTGCAGACAATGAAAGACCATTAATAATTGGAGTGCCACGTAGAGTAAGTTTCATTGAATTTGTTACTGCAGTCAATGGAAGCCACGAAAACATTGAAGGATTCTGTATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCTTATGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTACTCCAATCCTAGTTATGATGACCTTGTGAAGAACGTTGCAAATGGTATATTTGATGCAGCTGTTGGAGATATTGCAATTGTTACCAATCGAACAAGGATTGTGGATTTTTCTCAGCCTTTTGCTTCTACCGGGCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCAAATGCTTGGGTGTTCCTTAAACCATTTACAACAGAGATGTGGTGCGTAACATCGGCGTCCTTTTTTATGATTGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGGCAGCTAGTGACAGTAATACTGTTCAGCTTCTCGACATTGTTCAAAACGAATCAGGAAGCTACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACGTCAAGCTATACAGCCAGTCTCACTTCAATCCTTACAGTTCAGCAGCTTTCATCTCCCATTAAAGGACTTGATGACTTGATTACTAATGAACAGCCAATTGGCTACCAGGTAGGATCATTTGCGTATAGCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTTGTGTCTCTAGGCTCTCCAGAAGAGTATGAATCAGCACTGCTAAAGGGGCCATTCAAAAAAGGAGGGGTGGCGGCTATTGTAGATGAACTTCCATATATGGAATTGTTCTTATCAGGGAGGAATGATTTCGGAATGATTGGACAGCCATTCACCAAGAGTGGATGGGGATTTGCTTTTCAGAGAGGATCTCCACTTGCGGTAGACATGTCAACTGCAATTCTAAAGCTTTCTGAGAATGGAAAGCTTCAGAAGATCCACGAGAAGTGGTTTTGTAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAGTCTGAGCCTAACCAGCTTCAGTTGGTCAGCTTCTGGGGTCTGTATCTCTTGTGCGGTGCCTTTTCACTCGTTGCTCTTCTTATATTTTTGCTCCGTATAGTTCGACAATTTGCTCGTTACATACGACAACAGAAGGAATCTTCTCATGCAGAATTGGTGTCATCAAATTCAAACTCAAGCTGGACGCAGGTTATATATAAGTTTATTGACTTTGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTTCGAAAGTATGATAATCAGAATCAGGCTAGCCAATAG | 2904 | 41.7 | MLKTLQMTLPLSLRDSFSSVTGVWFDGSRGKKLCGSVILSFDKQIIVVWWTLSENCSELVLFWLKILSDLQLCESLNQPAVVNIGAVFTFDSIIGRVAKVAMEAAVSDVNEDPSILNGTKLNLVMADTHCNVLLGSIGAFQVLEKDVVAIVGPQSSVVAHMVLQIANNLQVPLISYAATDPTLSALQFPFFLRTTQSDAYQMTAMADLIDFYEWKEVIMIFVDDDYGRNGISTLTDELDKRMFKISYKIPLPSHFNPSEITVMLNKSKLLGPRVYVVHVNPDPRLSIFKIAHQLDMMTSDYVWLATDWLSTTLDSVLPVQQTSIDILQGVVVLRQHIPESNQQTTLWSRLRKMLPEGSRNSSLNVYALSAYDTIQVAARAIDKFLNEGRSITFSLKNKFHDLNTSRMPWGKLKIFDDGALLLSILLQANFTGLSGQIEFNSDRNLVNRGYEVINIDQTGLRRVGYWSNVTGFTIQSPETLKQKRLSYSHLNQALGNVTWPGGKTERPRGWVIADNERPLIIGVPRRVSFIEFVTAVNGSHENIEGFCIDLFNEARKLVPYDVPYRFIPFGNGYSNPSYDDLVKNVANGIFDAAVGDIAIVTNRTRIVDFSQPFASTGLVIVAPIKNSKSNAWVFLKPFTTEMWCVTSASFFMIGAVIWLLEHRVNDDFRGPPKRQLVTVILFSFSTLFKTNQEATVSPLGRMVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIKGLDDLITNEQPIGYQVGSFAYSYLTESLYLPRSRLVSLGSPEEYESALLKGPFKKGGVAAIVDELPYMELFLSGRNDFGMIGQPFTKSGWGFAFQRGSPLAVDMSTAILKLSENGKLQKIHEKWFCKMGCPGERRRKSEPNQLQLVSFWGLYLLCGAFSLVALLIFLLRIVRQFARYIRQQKESSHAELVSSNSNSSWTQVIYKFIDFVDEKEEAIKRLFRKYDNQNQASQ | 967 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 14035235 | 14041455 | + | CaPI482276_02g009640.1 | Cam02g0964 | 120706 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g0964 | 967 | CDD | GluR_Plant | 517 | 861 | - | - | |
Cam02g0964 | 967 | PIRSF | IGluLR_plant | 53 | 967 | IPR017103 | - | |
Cam02g0964 | 967 | FunFam | Glutamate receptor | 514 | 631 | - | - | |
Cam02g0964 | 967 | FunFam | Glutamate receptor | 631 | 761 | - | - | |
Cam02g0964 | 967 | Pfam | Ligand-gated ion channel | 862 | 892 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cam02g0964 | 967 | CDD | PBP1_GABAb_receptor_plant | 83 | 473 | IPR044440 | - | |
Cam02g0964 | 967 | Gene3D | - | 809 | 868 | - | - | |
Cam02g0964 | 967 | FunFam | Glutamate receptor | 197 | 353 | - | - | |
Cam02g0964 | 967 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 82 | 924 | IPR015683 | GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER) | |
Cam02g0964 | 967 | Gene3D | - | 197 | 471 | - | - | |
Cam02g0964 | 967 | Gene3D | - | 631 | 763 | - | - | |
Cam02g0964 | 967 | Pfam | Receptor family ligand binding region | 99 | 456 | IPR001828 | - | |
Cam02g0964 | 967 | SMART | GluR_14 | 520 | 863 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cam02g0964 | 967 | Coils | Coil | 945 | 965 | - | - | |
Cam02g0964 | 967 | FunFam | Glutamate receptor | 757 | 865 | - | - | |
Cam02g0964 | 967 | SUPERFAMILY | Periplasmic binding protein-like I | 78 | 511 | IPR028082 | - | |
Cam02g0964 | 967 | Gene3D | - | 527 | 630 | - | - | |
Cam02g0964 | 967 | SUPERFAMILY | Periplasmic binding protein-like II | 494 | 861 | - | - | |
Cam02g0964 | 967 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 540 | 639 | IPR001638 | - | |
Cam02g0964 | 967 | Gene3D | - | 100 | 447 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0964 | Cam-Chr2:14035235 | Cam11g1903 | Cam-Chr11:31544418 | 3.60E-261 | dispersed | |
Cam02g0964 | Cam-Chr2:14035235 | Cam02g0965 | Cam-Chr2:14091099 | 5.40E-249 | tandem | |
Cam08g1934 | Cam-Chr8:25269149 | Cam02g0964 | Cam-Chr2:14035235 | 1.00E-103 | transposed | |
Cam02g0197 | Cam-Chr2:2887941 | Cam02g0964 | Cam-Chr2:14035235 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g0964 | K05387 | - | csv:101215715 | 1670.6 |