Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g0965 | ATGAAGGTGTTTTGGATTAGGAGGAATGGGCATTGGGTCAAAAGCAGAGTGATGTTATTTGCATTATTATTGTTGTTTGGGATGTGGATGCCTTTGGGAGTGATTGGTGTTTCTTCTTCGAATCAAAGGGTGTTGAACATTGGAGTTTTGTTCACTCTTGATTCAGTTATTGGAAGGTCTGCACAGCCTGCAATTTTAGCTGCCCTAGACGACGTCAATGCTGATAACAACATTCTTCCAGGAACAAAGCTGAATTTGATCCTACATGACACCAACTGCAGTGGATTTCTTGGAACTCTGGAAGCCTTGCAGTTGATGGAAGATGAAGTGGTTGTTGTTATTGGGCCGCAATCTTCGGGCATCGTTCACGTTATTTCTCATGTTGTTAATGAACTTCATATACCGCTTCTATCATTTGGAGCTACAGATCCTGCTTTGTCTGCACAACAATACCAGTATTTCGTTCGGACCACACAAAGTGATTACTTTCAAATGAATGCAATTGCTGATATGGTAGATTATTTTAAATGGAGAGAGGTCGTTGCCATTTTTGTAGATGATGATAATGGCAGGAGTGGGATATCAGCATTGAATGATGCCTTAGTGAAGAAGCGAGCCAAGATCTCTTATAAGGCTGCCTTCCCTCCTGGATCCTCCAATAGCGAAATAAGTGACTTGTTGGCTTCGATAAACTTGATGGAATCTCGGGTTTACATTGTACACGTCAATCCCGACACAGGTTTATCAATATTTTCAATAGCTAAGAAACTTCAAATGATGGGTAGTGGCTATGTCTGGATCGCAACAGATTGGCTTCCTTCTTTTCTTGATTCTTTTGAAACAAATAGTCCTGATGTAATGAATCAGTTACAAGGTGTTGTTGCTCTTCGTCACCACACCCCTGATGACAATCTAAAGAAAAACTTTGTCTCCAAGTGGAGGAATCTAAAATACAAGAAGAGTCCAAACTTCAACTCTTATGCACTCTATGCATACGACTCTGTTTGGTTAGCAGCCCGTGCTCTTGACACCTTTATTAAAGAAGGTGGAAATATATCCTTTTCCAATGACCCAAAGTTACGTGAAAACAATGGAAGCATGTTGCAGTTAAAATCCCTCCGAGTGTTTAACGATGGTGAACAACTTCTACAGACAATTAAGAGAACAAACTTCACTGGTGTAAGCGGGCAAATTCAATTTGGGGATGATAGAAATTTGATTCATCCAGCTTATGATATCCTAAACATTGGGGGAACTGGTTCACGTAGAATTGGCTACTGGTCAAATTATTCTGGTCTATCAACTATTGCACCAGAGAACTTGTATACCAAGCATCTTAATGCTTCCTCAAATAACCATCTCTATAGTGTCATATGGCCAGGTGAAATAACGACCGTTCCTCGAGGATGGGTGTTTCCACACAATGGGAAACCATTACAAATTGTAGTACCTAACCGAGTGAGTTACAAAGCCTTTGTGTTTAAAGACAAGAACCCTCCAGGAGTTAAAGGATATTGTATAGATGTATTTGAAGCTGCCATAAACTTGTTACCTTATCCAGTTCCTCACATATATATATTATATGGAGATGGAAAGGACACTCCTGAGTACAACAGTCTTGTATATGAGGTTTCACAGAATAAATACGATGCAGCTGTTGGAGATATTACTATTGTAACGAATAGGACAAAGATTGTAGACTTCACACAACCATTTATGGAGTCGGGACTTGTTGTAGTTACTGTCGTCAAACAGGAGAAGTCTAGTCCATGGGCTTTTCTCAGGCCGTTTACTGTTCAAATGTGGGCTGTCACTGCAATATTTTTTATTTTTGTTGGAGCAGTTGTCTGGATTCTCGAGCACCGGACTAATGAAGAGTTTCGTGGTCCGCCAAGGCAACAATTAATTACAATATTTTGGTTTAGTTTCTCAACAATGTTCTTTTCTCATAAGGAAAATACTGTAAGCACCCTTGGACGGTTGGTGCTGATAATATGGCTCTTTGTTGTGTTAATTATCAACTCAAGCTACACAGCTAGTTTGACGTCGATCTTAACAGTGCAACAACTAACGTCAAAGATTGAAGGGATTGATAGCTTAATCTCTAGCACAGATGCCATTGGAGTTCAAGAAGGGTCATTTGCATTGAATTATCTGATTGATGAGCTGAATATAGCAGCATCTAGGATCATTAAATTGAAAAATCAAGAGGAATATGCTGATGCTCTTAAGCGTGGATCGGGAAATGGTGGGGTTGCTGCCATTGTTGACGAGCTTCCTTATGTTGAGCTTTTTTTGGCTGGTACTGATTGCCTATATAGGACAGTTGGACAGGAGTTCACGAAAAGTGGATGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCAGTTGATTTGTCAACAGCCATTCTTCAACTTTCAGAGAATGGTGATCTTCAAAAGATCCACGACAAATGGCTCTCGCGAACTGAGTGTTCGATGAGCTTGAACCAGGTCGACGTAAGCCAACTATCACTAAGTAGCTTTTGGGGATTGTTCCTAATTTGTGGCATTGCATGTTTTGTTGCTCTTTCGGTATTCTTCTTTCGAGTATTATTCCAATATCGAAGATTTACCCCAGAAAACCAGCCTGAAGTTGAAGAGATTGAACCTGTTAGGACGAGACGCCTTAGTCGTACAACTAGCTTCATGCACTTTGTAGATAAAAAAGAAGCAGAAGTCAAAGGACACCATTCGCTGCCACTTTTTACCCGTGCTCACACCGTTGCCGTCGGCCTCAACGGCTCAAGCCCCCTCTCTCGTCTCTTCCATCTGAAGGCCGCCCCACCTCGTGTTCACCGGTGCCGCTGCAGCCTTCTTATTCGAACCGAGGTCGAATTTCAAATCTCACTTCCGGCAACTCCACCTCCGTCTTCCCCACCATCGACAACGACTCCACCTGCAACCCACCACGAACAACTCTACCACCTGCACCATTGA | 2979 | 41.83 | MKVFWIRRNGHWVKSRVMLFALLLLFGMWMPLGVIGVSSSNQRVLNIGVLFTLDSVIGRSAQPAILAALDDVNADNNILPGTKLNLILHDTNCSGFLGTLEALQLMEDEVVVVIGPQSSGIVHVISHVVNELHIPLLSFGATDPALSAQQYQYFVRTTQSDYFQMNAIADMVDYFKWREVVAIFVDDDNGRSGISALNDALVKKRAKISYKAAFPPGSSNSEISDLLASINLMESRVYIVHVNPDTGLSIFSIAKKLQMMGSGYVWIATDWLPSFLDSFETNSPDVMNQLQGVVALRHHTPDDNLKKNFVSKWRNLKYKKSPNFNSYALYAYDSVWLAARALDTFIKEGGNISFSNDPKLRENNGSMLQLKSLRVFNDGEQLLQTIKRTNFTGVSGQIQFGDDRNLIHPAYDILNIGGTGSRRIGYWSNYSGLSTIAPENLYTKHLNASSNNHLYSVIWPGEITTVPRGWVFPHNGKPLQIVVPNRVSYKAFVFKDKNPPGVKGYCIDVFEAAINLLPYPVPHIYILYGDGKDTPEYNSLVYEVSQNKYDAAVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKQEKSSPWAFLRPFTVQMWAVTAIFFIFVGAVVWILEHRTNEEFRGPPRQQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSKIEGIDSLISSTDAIGVQEGSFALNYLIDELNIAASRIIKLKNQEEYADALKRGSGNGGVAAIVDELPYVELFLAGTDCLYRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSRTECSMSLNQVDVSQLSLSSFWGLFLICGIACFVALSVFFFRVLFQYRRFTPENQPEVEEIEPVRTRRLSRTTSFMHFVDKKEAEVKGHHSLPLFTRAHTVAVGLNGSSPLSRLFHLKAAPPRVHRCRCSLLIRTEVEFQISLPATPPPSSPPSTTTPPATHHEQLYHLHH | 992 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 14091099 | 14098882 | + | CaPI482276_02g009650.1 | Cam02g0965 | 120707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g0965 | 992 | FunFam | Glutamate receptor | 474 | 590 | - | - | |
Cam02g0965 | 992 | Gene3D | - | 774 | 827 | - | - | |
Cam02g0965 | 992 | Gene3D | - | 64 | 408 | - | - | |
Cam02g0965 | 992 | Pfam | Ligand-gated ion channel | 599 | 853 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cam02g0965 | 992 | Pfam | Receptor family ligand binding region | 61 | 418 | IPR001828 | - | |
Cam02g0965 | 992 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 58 | 74 | - | - | |
Cam02g0965 | 992 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 249 | 272 | - | - | |
Cam02g0965 | 992 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 118 | 146 | - | - | |
Cam02g0965 | 992 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 46 | 888 | IPR015683 | GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER) | |
Cam02g0965 | 992 | FunFam | Glutamate receptor | 716 | 824 | - | - | |
Cam02g0965 | 992 | PIRSF | IGluLR_plant | 14 | 921 | IPR017103 | - | |
Cam02g0965 | 992 | CDD | PBP1_GABAb_receptor_plant | 46 | 434 | IPR044440 | - | |
Cam02g0965 | 992 | SMART | GluR_14 | 480 | 822 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cam02g0965 | 992 | CDD | GluR_Plant | 477 | 820 | - | - | |
Cam02g0965 | 992 | MobiDBLite | consensus disorder prediction | 963 | 992 | - | - | |
Cam02g0965 | 992 | Pfam | Ligated ion channel L-glutamate- and glycine-binding site | 500 | 581 | IPR019594 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Cam02g0965 | 992 | SUPERFAMILY | Periplasmic binding protein-like II | 454 | 821 | - | - | |
Cam02g0965 | 992 | Gene3D | - | 473 | 588 | - | - | |
Cam02g0965 | 992 | FunFam | Glutamate receptor | 590 | 720 | - | - | |
Cam02g0965 | 992 | Gene3D | - | 589 | 721 | - | - | |
Cam02g0965 | 992 | FunFam | Glutamate receptor | 160 | 320 | - | - | |
Cam02g0965 | 992 | SUPERFAMILY | Periplasmic binding protein-like I | 40 | 471 | IPR028082 | - | |
Cam02g0965 | 992 | Gene3D | - | 160 | 433 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0197 | Cam-Chr2:2887941 | Cam02g0965 | Cam-Chr2:14091099 | 1.10E-246 | dispersed | |
Cam02g0965 | Cam-Chr2:14091099 | Cam11g1903 | Cam-Chr11:31544418 | 4.20E-281 | dispersed | |
Cam02g0965 | Cam-Chr2:14091099 | Cam02g0967 | Cam-Chr2:14142322 | 0.00E+00 | proximal | |
Cam02g0964 | Cam-Chr2:14035235 | Cam02g0965 | Cam-Chr2:14091099 | 5.40E-249 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g0965 | K05387 | - | csv:101215485 | 1652.11 |