Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g0971 ATGCCTGCCGGAATTATGACACCGGCCAGAAGCATGGCGTCGATGATTGGAAGAAATGAGAATAATGCTGCTGGATTTGCCTCTCCTTCTGGATTTCCTCTTTCTCAGTCAAGCATGATGGACAGTCATCTCCTCCCCTTAGACATCCCTCAAAACACTTCCGAAAGCGACCTTGCTCGAATCCGAGACGATGACTTCGACAGTGCCACTAAATCCGGCAGCGACAACAACCCTGACCTTGTCTCCGGTGACGACCAAGATCCTCGTCCTAAAAAGAAGCGCTATCATCGTCATACTCAACATCAGATCCAAGAAATGGAAGCATTCTTCAAGGAGTGTCCTCACCCTGATGACAAACAAAGAAAGGAATTAAGCAGGGAATTAGGGTTAGAGCCGTTGCAAGTCAAATTTTGGTTCCAAAACAAACGCACTCAAATGAAGAATCAACACGAGCGGCATGAGAACACTCAACTCAGAACAGAAAATGAGAAGCTTAGGGCTGATAACATGAGATACAGAGAAGCTCTTAGCAATGCCTCGTGCCCTAATTGTGGTGGCCCTACTGCCATTGGTGAAATGTCTTTTGATGAACATCATCTTAGACTCGAAAATGCCCGTCTTCGAGAAGAGATCGATCGCATTTCAGCAATAGCTGCAAAATACGTAGGGAAGCCAGTCGTGAACTACCCTCTACTTTCTCCACCAGTTCCAGCTCGCCCACTAGAGCTAGGAATGGGCAACTTCGGACCACAACCAGGCCTCGGAGGAGGAGACCTCTACAGCTCGGCCAGCGACCTGATCCGATCCATCAGCGCCCCAACGGAGGCTGATAAGCCAATGATCATCGAGCTTGCAGTTGCAGCCATGGAAGAGCTGACTAGAATGGCTCAAATGGGGGAGCCATTGTGGATGACTAGCCTTGATGGCTCCACCCATGTACTCAATGAAGATGAGTACTTGAGAACGTTTCCTAGAGGCATTGGTCCTAAGCCTTCTGGGTTTAAATGTGAAGCCTCTCGTGAATCTGCTGTTGTCATCATGAACCACATTAACCTAGTTGAGATTCTCATGGATGTGAACCAATGGTCGACTTTATTTTCTGGAATTGTGTCTAGAGCTATGACACTTGAAGTATTATCAACCGGAGTTGCTGGAAATTACAATGGAGCTTTGCAAGTGATGACGTCGGAATTTCAAGTTCCATCGCCATTGGTTCCGACCCGGGAAAGCTACTTCGTTAGATATTGTAAGCAACATGGGGATGGGACATGGGCGGTGGTGGATGTTTCGTTGGATGATTTGCGCCCTACCCCCGGAGTTCGATGTAGACGAAGACCTTCCGGTTGTTTGATCCAAGAAATGCCAAATGGTTATTCGAAGGTTACATGGGTTGAGCATGTAGAGGTGGATGATAGAGGAGTTCATAATCTTTACAAGCAACTAGTGAGCTCTGGCCAAGCTTTTGGGGCCAAACGTTGGGTTACAACTTTAGATCGCCAATGTGAACGACTTGCTAGTGCCATGGCTACTAATATTCCAACTGGGGATGTTGGAGTGATAACGAATCAAGAAGGAAGAAAGAGCATGTTGAAGCTGGCTGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGCGCCTCCACAACTCACACATGGACCACTTTGTCGGGTACGGGTGCAGACGATGTTCGAGTCATGACTCGAAAGAGCATCGACGACCCGGGAAGACCTCCCGGTATTGTCCTCAGTGCTGCAACTTCCTTCTGGCTCCATGTTCCACCCAAGAGAATCTTCGATTTCCTTCGAGATGAAAACTCTCGCAGCGAGTGGGACATTCTTTCCAACGGCGGAGTAGTTCAAGAAATGGCCCACATTGCCAATGGCCGTGACACTGGCAACTGCGTTTCTCTCTTACGAGTAAATAGCGCAAATTCAAGCCAAAGCAACATGCTAATCCTGCAAGAAAGCTGCACGGACCCAACAGCCTCATTTGTGATCTACGCTCCAGTTGACATAGTAGCAATGAACGTCGTCCTGAACGGCGGTGATCCCGACTACGTAGCACTTCTCCCCTCAGGCTTTGCCATTCTCCCTGACGGCGCTGGCGGAGAGGGCGTTTCCGGTGGGTCGTTGCTGACGGTTGCATTTCAAATCCTGGTGGATTCAGTGCCCACGGCAAAACTGTCACTTGGGTCAATTGCAACGGTAAACAATCTGATAGCTTGTACGGTGGAGAGGATAAAAGCGTCATTATCATGTGAGAATGCATAA 2271 48.44 MPAGIMTPARSMASMIGRNENNAAGFASPSGFPLSQSSMMDSHLLPLDIPQNTSESDLARIRDDDFDSATKSGSDNNPDLVSGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPARPLELGMGNFGPQPGLGGGDLYSSASDLIRSISAPTEADKPMIIELAVAAMEELTRMAQMGEPLWMTSLDGSTHVLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDDLRPTPGVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLHVPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGAGGEGVSGGSLLTVAFQILVDSVPTAKLSLGSIATVNNLIACTVERIKASLSCENA 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14250594 14255470 - CaPI482276_02g009710.1 Cam02g0971 120713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g0971 756 FunFam Homeobox-leucine zipper protein HDG1 79 165 - -
Cam02g0971 756 FunFam Homeobox-leucine zipper protein GLABRA 2 283 502 - -
Cam02g0971 756 MobiDBLite consensus disorder prediction 65 100 - -
Cam02g0971 756 Pfam Homeodomain 92 148 IPR001356 GO:0003677(InterPro)
Cam02g0971 756 Gene3D - 333 502 IPR023393 -
Cam02g0971 756 Pfam START domain 284 503 IPR002913 GO:0008289(InterPro)
Cam02g0971 756 CDD homeodomain 92 150 IPR001356 GO:0003677(InterPro)
Cam02g0971 756 SUPERFAMILY Homeodomain-like 78 149 IPR009057 -
Cam02g0971 756 CDD START_ArGLABRA2_like 278 502 - -
Cam02g0971 756 SMART START_1 283 503 IPR002913 GO:0008289(InterPro)
Cam02g0971 756 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677(InterPro)
Cam02g0971 756 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 72 754 IPR042160 -
Cam02g0971 756 SMART HOX_1 90 153 IPR001356 GO:0003677(InterPro)
Cam02g0971 756 Coils Coil 143 175 - -
Cam02g0971 756 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cam02g0971 756 ProSiteProfiles START domain profile. 274 506 IPR002913 GO:0008289(InterPro)
Cam02g0971 756 SUPERFAMILY Bet v1-like 522 748 - -
Cam02g0971 756 Gene3D - 81 166 - -
Cam02g0971 756 SUPERFAMILY Bet v1-like 274 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0971 Cam-Chr2:14250594 Cam03g0488 Cam-Chr3:5826529 1.60E-256 dispersed
Cam07g0133 Cam-Chr7:2500110 Cam02g0971 Cam-Chr2:14250594 5.70E-12 transposed
Cam01g2268 Cam-Chr1:34996730 Cam02g0971 Cam-Chr2:14250594 2.00E-264 wgd
Cam02g0194 Cam-Chr2:2859260 Cam02g0971 Cam-Chr2:14250594 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51478 PF01852 START 7.40E-60 CL0209 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g0971 K09338 - csv:101214763 1441.02