Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1214 | ATGGCGGCAACTGTCTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCGGAGCTTCTCAAGGACCAGCAGGACCAGTCTCGCCAGGAATCGGAGCCCAGTGCCGACTTTCCATCTCTCGCCGCCGCGGCCGCCACCAAACCTAAGAAGAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGACCTATGGCGGTCCAAAGCCGTCCTCTCAATCCAGTGATCCAAAGGGTCTGACGGCTGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACGGCGGAGGAGATGGACCGCAACCGTCTTGGTGGAGGCTTCAAGAGTTGGGGTCAGAATAGTTTGTACGACAGGGGGAATCGGTATTCTAACGCGGAAGATTCACCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAGTCAAGGAGGAGCAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGATTGAGAGGAGAGAGAGAGGAGGAGGAGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGACGAATCGGATAGTTGGGTATCGAGTAAGAGCTTTACACCTTCTGAAGGTCGGAGATCAGGCGGTATGGGTGGTGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCTCGAGCGGTGGTGGCGCCGATTCAGACAGTTGGGGCAGAAAATCTGAAGGGGCTAGAGGTGGAATTGGTGAGAACGGTGGTGGGGCAGATTCGGAAAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCTGCAGCAAAGCCAAAGGGTTCCAATCCTTTTGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAAGACTGGAAGAAGATTGATGAGCAACTCGAATCAATGAAAATTAAGGATACGGTGGAGAGAACCGAGAAATCTAGTGGGGCTTCGTTTGAGAGAAAAGGCTTTGGAGTTAGAAGTGGTCGGTCTCCCGAAGATCGGTCAGTAAGGAGTTGGAGGAAGCCAGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGACCTGCTGAGGATTGA | 1230 | 52.76 | MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSSQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNAEDSPNSRRGSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGIERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGMGGGFDRERRGGFPSSGGGADSDSWGRKSEGARGGIGENGGGADSENWGKKSEGVRGGIGERPRLNLQPRSIPLNNGNQEASGAAAKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESMKIKDTVERTEKSSGASFERKGFGVRSGRSPEDRSVRSWRKPESVESRPQSAEVVEDGPAED | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24107461 | 24109378 | + | CaPI482276_02g012140.1 | Cam02g1214 | 120956 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1214 | 409 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 398 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro) | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 372 | 394 | - | - | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 330 | 363 | - | - | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 19 | 35 | - | - | |
Cam02g1214 | 409 | Coils | Coil | 16 | 36 | - | - | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 62 | 84 | - | - | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 120 | 138 | - | - | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 19 | 409 | - | - | |
Cam02g1214 | 409 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 362 | IPR010433 | GO:0003743(InterPro) | |
Cam02g1214 | 409 | MobiDBLite | consensus disorder prediction | 139 | 176 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1214 | Cam-Chr2:24107461 | Cam08g2233 | Cam-Chr8:27541036 | 9.80E-27 | dispersed | |
Cam02g0451 | Cam-Chr2:5223378 | Cam02g1214 | Cam-Chr2:24107461 | 1.30E-97 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1214 | K03258 | - | csv:101214573 | 682.945 |