Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1214 ATGGCGGCAACTGTCTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCGGAGCTTCTCAAGGACCAGCAGGACCAGTCTCGCCAGGAATCGGAGCCCAGTGCCGACTTTCCATCTCTCGCCGCCGCGGCCGCCACCAAACCTAAGAAGAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGACCTATGGCGGTCCAAAGCCGTCCTCTCAATCCAGTGATCCAAAGGGTCTGACGGCTGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACGGCGGAGGAGATGGACCGCAACCGTCTTGGTGGAGGCTTCAAGAGTTGGGGTCAGAATAGTTTGTACGACAGGGGGAATCGGTATTCTAACGCGGAAGATTCACCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAGTCAAGGAGGAGCAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGATTGAGAGGAGAGAGAGAGGAGGAGGAGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGACGAATCGGATAGTTGGGTATCGAGTAAGAGCTTTACACCTTCTGAAGGTCGGAGATCAGGCGGTATGGGTGGTGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCTCGAGCGGTGGTGGCGCCGATTCAGACAGTTGGGGCAGAAAATCTGAAGGGGCTAGAGGTGGAATTGGTGAGAACGGTGGTGGGGCAGATTCGGAAAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCTGCAGCAAAGCCAAAGGGTTCCAATCCTTTTGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAAGACTGGAAGAAGATTGATGAGCAACTCGAATCAATGAAAATTAAGGATACGGTGGAGAGAACCGAGAAATCTAGTGGGGCTTCGTTTGAGAGAAAAGGCTTTGGAGTTAGAAGTGGTCGGTCTCCCGAAGATCGGTCAGTAAGGAGTTGGAGGAAGCCAGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGACCTGCTGAGGATTGA 1230 52.76 MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSSQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNAEDSPNSRRGSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGIERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGMGGGFDRERRGGFPSSGGGADSDSWGRKSEGARGGIGENGGGADSENWGKKSEGVRGGIGERPRLNLQPRSIPLNNGNQEASGAAAKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESMKIKDTVERTEKSSGASFERKGFGVRSGRSPEDRSVRSWRKPESVESRPQSAEVVEDGPAED 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24107461 24109378 + CaPI482276_02g012140.1 Cam02g1214 120956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1214 409 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 398 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Cam02g1214 409 MobiDBLite consensus disorder prediction 372 394 - -
Cam02g1214 409 MobiDBLite consensus disorder prediction 330 363 - -
Cam02g1214 409 MobiDBLite consensus disorder prediction 19 35 - -
Cam02g1214 409 Coils Coil 16 36 - -
Cam02g1214 409 MobiDBLite consensus disorder prediction 62 84 - -
Cam02g1214 409 MobiDBLite consensus disorder prediction 120 138 - -
Cam02g1214 409 MobiDBLite consensus disorder prediction 19 409 - -
Cam02g1214 409 Pfam Plant specific eukaryotic initiation factor 4B 7 362 IPR010433 GO:0003743(InterPro)
Cam02g1214 409 MobiDBLite consensus disorder prediction 139 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1214 Cam-Chr2:24107461 Cam08g2233 Cam-Chr8:27541036 9.80E-27 dispersed
Cam02g0451 Cam-Chr2:5223378 Cam02g1214 Cam-Chr2:24107461 1.30E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1214 K03258 - csv:101214573 682.945