Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1231 ATGGGTTCTTTGAAGCTGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGGTTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGAAACAACTACACTTTTTCCAACTACTCCGACTCCCTCAAATCTCTGATGAATCTAACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGAAAAGCCTTCGGACTTCTAGCCGGAATCGCCTGTGACCGGTTTCCCACATGGGTGATCTTGCTTATTGGATCTCTTGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTTGTCGTTAGCCAAAGGATTTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTTTGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACTTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACCGCTCTGTTTTCCTCTGACCCATCTTCTTTCCTCCTCATGCTCGCCTTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCAACCACCGCCGCCGATACCCAACAAGAATCCAATTACTTCTCCGTCTTCAACGCTCTCGCCGTCGTCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTCCGGCAGGCTCTTCTCCCAAATATTCTCCATCGGGCTACTGATTCTCCTCGGATCCCCTTTGATCATCCCAATTTACACGTTTTTCAAGAGCTGGCACTCGAATCGAGCCGGATCGGATCTGGAAGCTCGAATTGAGGAGCCGCTACTGAAAGAAGAGGCAGTTGCGGCGCCGGTAAAGGAGGAAGCAGAGGAAATTGCAGAGGTAGAGCAGAGAGCGCCGGTGATCGGAGAAGAACACACGATTTTTGAAGCGGTGAGAACAATTGATTTCTGGGTGTTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCCGATGTTTCAGTGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTCGGCCGGATTCTTTCCGGAACACTTTCCGAGCACTTTCTCAAAAAAGTAGGCACACCAAGACCTCTATGGAACGCTGCATCTCAAATTCTAATGACCGTTGGATATGTTTTGCTGGCCATGGCAATGCCAGGTTCTCTCTACATCGGCTCGGTCATCGTCGGGATCTGCTACGGTGTTCGTCTCTCCGTCACTGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCAATCGGATCCTTCCTCTTCTCTGGCCTCCTTGCAGGGTTTCTCTACGACATGGAAGCGACCCCGATCGAGGGCGGCGGAAACACGTGCATCGGAGGGCATTGCTACAGAATTGTGTTTGTTGTGATGGCGTTGGCCTGTGTAATTGGGTTTGTTTTGGACATTTGGTTGGCGTGTAGAACCAAAGAGCTTTATTCTAAGCTTAAAGCCAACAAGAAATCAAAGAAGGGAAACAACAATAACAACTCCTAG 1632 50.55 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDSLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSSDPSSFLLMLAFVPFAVCLFAMFFLREIPPPTTAADTQQESNYFSVFNALAVVVAVYLLCFDFIKNSGRLFSQIFSIGLLILLGSPLIIPIYTFFKSWHSNRAGSDLEARIEEPLLKEEAVAAPVKEEAEEIAEVEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSVFVSLTSIWGFFGRILSGTLSEHFLKKVGTPRPLWNAASQILMTVGYVLLAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPIEGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLACRTKELYSKLKANKKSKKGNNNNNS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24431361 24435338 - CaPI482276_02g012310.1 Cam02g1231 120973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1231 543 Gene3D MFS general substrate transporter like domains 10 208 IPR036259 -
Cam02g1231 543 CDD MFS_Mch1p_like 13 510 - -
Cam02g1231 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 528 - GO:0016020(PANTHER)
Cam02g1231 543 Gene3D MFS general substrate transporter like domains 282 540 IPR036259 -
Cam02g1231 543 SUPERFAMILY MFS general substrate transporter 14 522 IPR036259 -
Cam02g1231 543 Pfam Nodulin-like 14 260 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1231 Cam-Chr2:24431361 Cam06g1797 Cam-Chr6:29080974 3.10E-84 dispersed
Cam03g0019 Cam-Chr3:1210279 Cam02g1231 Cam-Chr2:24431361 2.40E-62 transposed
Cam06g0165 Cam-Chr6:3538142 Cam02g1231 Cam-Chr2:24431361 6.20E-67 transposed
Cam07g1327 Cam-Chr7:27616830 Cam02g1231 Cam-Chr2:24431361 1.40E-92 transposed
Cam07g1433 Cam-Chr7:28885310 Cam02g1231 Cam-Chr2:24431361 4.50E-70 transposed
Cam11g0738 Cam-Chr11:9204577 Cam02g1231 Cam-Chr2:24431361 1.60E-86 transposed
Cam02g0444 Cam-Chr2:5164402 Cam02g1231 Cam-Chr2:24431361 3.40E-210 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1231 - - - 0.0