Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1236 ATGGCCGCTTTTCTCTCCACTTCTCTTTCCCCTTTCTTCTTCCTTCTTCTCTTAATCCTTCTCTCTACAGTCTCAGCCGATTCGCCATTGAAGACCTTCATCTTCCGTGTCGACCGTTTCTCTAAACCCTCTGTTTTTCCTACCCATTACCACTGGTACACTTCCGAGTTCGCCGAATCCCCCAAAATCCTCCATGTTTACGACACTGTCTTCCACGGATTCTCTGCAACTTTAACTCAAGACCAAGTCGATTCCATCGGAAAACACCCTTCTGTGCTCGCCGTTTTTGAGGACCGTCGTCGTCAGCTTCACACCACCCGTTCCCCTCAATTTCTCGGCCTTCGAAACCAGCGTGGTCTCTGGTCTGATTCCGATTACGGCTCCGATGTAATCATTGGAGTTTTCGATACTGGGATTTCCCCTGAACGACGAAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAAGGGGTTTGTGAGACTGGAACTAAGTTCACGGCCAAGAACTGTAACAGGAAGATCGTTGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCAGGGTCCAACGCTGCCGGTCCGATTATTGGGATAAACGACACGATTGAGTACAGATCTCCGAGAGACGCTGACGGCCATGGGACACATACGGCGTCGACGGCGGCCGGACGGCACGCGTTTCAGGCTAGTCTGGAGGGTTATGCTTCTGGAATAGCAAAGGGCGTGGCCCCTAAGGCGCGTTTAGCGGTTTACAAAGTTTGTTGGAAAAACTCGGGTTGTTTTGATTCCGATATTCTCGCGGCGTTTGATGCTGCGGTTAACGACGGCGTCGACGTCATTTCGATCTCAATTGGAGGCGGCGATGGCGTTTCCTCACCGTATTATCTTGACCCAATTGCAATCGGAGCGTACGGCGCCGCTTCCAGGGGTGTTTTCGTTTCGTCTTCGGCTGGGAACGATGGACCCAATGGAATGTCAGTGACGAACTTGGCGCCGTGGGTTACGACGGTTGGAGCAGGTACGATCGATCGGAATTTCCCGGCGGTGGTGACTCTGGGAAACGGACGAAAGATTTCCGGGGTATCGCTCTACGCTGGAGCGCCGTTGAACGGTACAATGTATCCATTGGTTTACCCTGGGAAATCAGGAGTGCTCTCTGTTTCGCTCTGTATGGAGAATTCGCTCGATCCTAAGGCTGTTGCCGGAAAAATTGTGATCTGCGACAGGGGAAGTAATCCCAGAGTGGCTAAGGGTTTGGTCGTGAAGAAAGCCGGCGGCGTCGGAATGATTCTAGCAAACGGAATCTCAAACGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCCGCCTGCGCAGTTGGCTCCGACGAAGGCGATGCCATGAAAGCCTACGCATCGTCCTCCGCCAATCCCACCGCCACCATCGCCTTCCAAGGCACTATAATCGGAATCAAACCGGCGCCAGTTGTGGCTTCGTTTTCCGCCAGAGGGCCAAACGGATTAAACCCAGAAATTCTAAAACCAGACTTAATCGCACCAGGGGTTAACATTCTCGCCGCCTGGACCGACGCCGTTGGTCCAACCGGTTTGGACTTCGATACACGAAAAACAGAGTTCAACATCTTGTCCGGTACATCAATGGCTTGCCCCCATGTAAGTGGAGCTGCTGCTCTGTTGAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCGGCCATGATGACCACCGCAAGTATTACCGATAACCGCCGCCAACCAATGACGGAAGAATCCACCGGAAAAGCTTCAACGCCTTACGATTTCGGTGCCGGACATGTAAATTTGGGGCTCGCAATGGACCCAGGTCTAGTCTACGACATTACGAACGCCGATTACATAAACTTCTTATGCTCAATCGGGTACGGACCGAAGATGATTCAGGTAATAACAAGAAAACCCGTGACATGTCCGGCGAAAAAACCATTACCGGAAAATCTCAATTACCCATCAATCGTAGCAGTATTTTCTAGTCTATCAAAAGGGTGGTCGACGAAGTCGTTTATCCGAACGGCGACGAACGTGGGTCCATCAAATTCAGTGTACAGAGCTAAAATCGAAGCTCCAAAGGGGGTTACAGTGAAGGTAAAACCATCGAAACTGGTATTTTCATCGACGGTGAAGAAACAGAGCTTCGTAGTGGCAATATCAGCCGACAATCAGAATCTGGCTCTGGGCGATGTGGGCGCTGTTTTTGGTTGGCTTTCTTGGTCCGATGGAAAACATGTGGTTCGTAGCCCACTGGTAGTGACCCAATTAGAGCCTTTGTAA 2319 51.36 MAAFLSTSLSPFFFLLLLILLSTVSADSPLKTFIFRVDRFSKPSVFPTHYHWYTSEFAESPKILHVYDTVFHGFSATLTQDQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTAKNCNRKIVGARFFSKGHEAGSNAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKISGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKAVAGKIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSANPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNADYINFLCSIGYGPKMIQVITRKPVTCPAKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTATNVGPSNSVYRAKIEAPKGVTVKVKPSKLVFSSTVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24515148 24517466 + CaPI482276_02g012360.1 Cam02g1236 120978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1236 772 CDD Peptidases_S8_3 102 582 IPR034197 -
Cam02g1236 772 Gene3D - 633 769 - -
Cam02g1236 772 Pfam Subtilase family 127 594 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam02g1236 772 Pfam PA domain 376 462 IPR003137 -
Cam02g1236 772 SUPERFAMILY Subtilisin-like 103 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g1236 772 SUPERFAMILY PA domain 390 469 IPR046450 -
Cam02g1236 772 FunFam subtilisin-like protease SBT1.5 345 484 - -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cam02g1236 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 764 IPR045051 -
Cam02g1236 772 CDD PA_subtilisin_like 351 477 - -
Cam02g1236 772 Gene3D Peptidase S8/S53 domain 129 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g1236 772 Pfam Peptidase inhibitor I9 42 104 IPR010259 -
Cam02g1236 772 FunFam Subtilisin-like protease SBT1.5 633 769 - -
Cam02g1236 772 Gene3D - 345 484 - -
Cam02g1236 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 104 IPR037045 -
Cam02g1236 772 ProSiteProfiles Serine proteases, subtilase domain profile. 102 616 - -
Cam02g1236 772 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Cam02g1236 772 FunFam Subtilisin-like protease SBT1.5 129 359 - -
Cam02g1236 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1236 Cam-Chr2:24515148 Cam09g0130 Cam-Chr9:2116395 3.90E-242 dispersed
Cam02g1236 Cam-Chr2:24515148 Cam01g1779 Cam-Chr1:31352739 2.20E-213 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1236 - - - 0.0