Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1236 ATGGCCGCTTTTCTCTCCACTTCTCTTTCCCCTTTCTTCTTCCTTCTTCTCTTAATCCTTCTCTCTACAGTCTCAGCCGATTCGCCATTGAAGACCTTCATCTTCCGTGTCGACCGTTTCTCTAAACCCTCTGTTTTTCCTACCCATTACCACTGGTACACTTCCGAGTTCGCCGAATCCCCCAAAATCCTCCATGTTTACGACACTGTCTTCCACGGATTCTCTGCAACTTTAACTCAAGACCAAGTCGATTCCATCGGAAAACACCCTTCTGTGCTCGCCGTTTTTGAGGACCGTCGTCGTCAGCTTCACACCACCCGTTCCCCTCAATTTCTCGGCCTTCGAAACCAGCGTGGTCTCTGGTCTGATTCCGATTACGGCTCCGATGTAATCATTGGAGTTTTCGATACTGGGATTTCCCCTGAACGACGAAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAAGGGGTTTGTGAGACTGGAACTAAGTTCACGGCCAAGAACTGTAACAGGAAGATCGTTGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCAGGGTCCAACGCTGCCGGTCCGATTATTGGGATAAACGACACGATTGAGTACAGATCTCCGAGAGACGCTGACGGCCATGGGACACATACGGCGTCGACGGCGGCCGGACGGCACGCGTTTCAGGCTAGTCTGGAGGGTTATGCTTCTGGAATAGCAAAGGGCGTGGCCCCTAAGGCGCGTTTAGCGGTTTACAAAGTTTGTTGGAAAAACTCGGGTTGTTTTGATTCCGATATTCTCGCGGCGTTTGATGCTGCGGTTAACGACGGCGTCGACGTCATTTCGATCTCAATTGGAGGCGGCGATGGCGTTTCCTCACCGTATTATCTTGACCCAATTGCAATCGGAGCGTACGGCGCCGCTTCCAGGGGTGTTTTCGTTTCGTCTTCGGCTGGGAACGATGGACCCAATGGAATGTCAGTGACGAACTTGGCGCCGTGGGTTACGACGGTTGGAGCAGGTACGATCGATCGGAATTTCCCGGCGGTGGTGACTCTGGGAAACGGACGAAAGATTTCCGGGGTATCGCTCTACGCTGGAGCGCCGTTGAACGGTACAATGTATCCATTGGTTTACCCTGGGAAATCAGGAGTGCTCTCTGTTTCGCTCTGTATGGAGAATTCGCTCGATCCTAAGGCTGTTGCCGGAAAAATTGTGATCTGCGACAGGGGAAGTAATCCCAGAGTGGCTAAGGGTTTGGTCGTGAAGAAAGCCGGCGGCGTCGGAATGATTCTAGCAAACGGAATCTCAAACGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCCGCCTGCGCAGTTGGCTCCGACGAAGGCGATGCCATGAAAGCCTACGCATCGTCCTCCGCCAATCCCACCGCCACCATCGCCTTCCAAGGCACTATAATCGGAATCAAACCGGCGCCAGTTGTGGCTTCGTTTTCCGCCAGAGGGCCAAACGGATTAAACCCAGAAATTCTAAAACCAGACTTAATCGCACCAGGGGTTAACATTCTCGCCGCCTGGACCGACGCCGTTGGTCCAACCGGTTTGGACTTCGATACACGAAAAACAGAGTTCAACATCTTGTCCGGTACATCAATGGCTTGCCCCCATGTAAGTGGAGCTGCTGCTCTGTTGAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCGGCCATGATGACCACCGCAAGTATTACCGATAACCGCCGCCAACCAATGACGGAAGAATCCACCGGAAAAGCTTCAACGCCTTACGATTTCGGTGCCGGACATGTAAATTTGGGGCTCGCAATGGACCCAGGTCTAGTCTACGACATTACGAACGCCGATTACATAAACTTCTTATGCTCAATCGGGTACGGACCGAAGATGATTCAGGTAATAACAAGAAAACCCGTGACATGTCCGGCGAAAAAACCATTACCGGAAAATCTCAATTACCCATCAATCGTAGCAGTATTTTCTAGTCTATCAAAAGGGTGGTCGACGAAGTCGTTTATCCGAACGGCGACGAACGTGGGTCCATCAAATTCAGTGTACAGAGCTAAAATCGAAGCTCCAAAGGGGGTTACAGTGAAGGTAAAACCATCGAAACTGGTATTTTCATCGACGGTGAAGAAACAGAGCTTCGTAGTGGCAATATCAGCCGACAATCAGAATCTGGCTCTGGGCGATGTGGGCGCTGTTTTTGGTTGGCTTTCTTGGTCCGATGGAAAACATGTGGTTCGTAGCCCACTGGTAGTGACCCAATTAGAGCCTTTGTAA 2319 51.36 MAAFLSTSLSPFFFLLLLILLSTVSADSPLKTFIFRVDRFSKPSVFPTHYHWYTSEFAESPKILHVYDTVFHGFSATLTQDQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTAKNCNRKIVGARFFSKGHEAGSNAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKISGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKAVAGKIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSANPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNADYINFLCSIGYGPKMIQVITRKPVTCPAKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTATNVGPSNSVYRAKIEAPKGVTVKVKPSKLVFSSTVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24515148 24517466 + CaPI482276_02g012360.1 Cam02g1236 120978

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1236 772 CDD Peptidases_S8_3 102 582 IPR034197 -
Cam02g1236 772 Gene3D - 633 769 - -
Cam02g1236 772 Pfam Subtilase family 127 594 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam02g1236 772 Pfam PA domain 376 462 IPR003137 -
Cam02g1236 772 SUPERFAMILY Subtilisin-like 103 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g1236 772 SUPERFAMILY PA domain 390 469 IPR046450 -
Cam02g1236 772 FunFam subtilisin-like protease SBT1.5 345 484 - -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cam02g1236 772 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cam02g1236 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 764 IPR045051 -
Cam02g1236 772 CDD PA_subtilisin_like 351 477 - -
Cam02g1236 772 Gene3D Peptidase S8/S53 domain 129 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam02g1236 772 Pfam Peptidase inhibitor I9 42 104 IPR010259 -
Cam02g1236 772 FunFam Subtilisin-like protease SBT1.5 633 769 - -
Cam02g1236 772 Gene3D - 345 484 - -
Cam02g1236 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 104 IPR037045 -
Cam02g1236 772 ProSiteProfiles Serine proteases, subtilase domain profile. 102 616 - -
Cam02g1236 772 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Cam02g1236 772 FunFam Subtilisin-like protease SBT1.5 129 359 - -
Cam02g1236 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1236 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1236 Cam-Chr2:24515148 Cam09g0130 Cam-Chr9:2116395 3.90E-242 dispersed
Cam02g1236 Cam-Chr2:24515148 Cam01g1779 Cam-Chr1:31352739 2.20E-213 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cam07g0648 . 39 788 Subtilisin-like Serine Gene Family AT1G01900 56.2 3.1e-231 798.5
Cam07g0646 . 33 793 Subtilisin-like Serine Gene Family AT1G01900 54.7 5.3e-231 797.7
Cam07g0137 . 12 769 Subtilisin-like Serine Gene Family AT1G04110 67.0 7.3e-313 1069.7
Cam05g1721 . 3 762 Subtilisin-like Serine Gene Family AT1G20150 53.4 1.3e-224 776.5
Cam05g1721 . 6 505 Subtilisin-like Serine Gene Family AT1G20160 61.7 2.0e-171 599.4
Cam08g1518 . 207 664 Subtilisin-like Serine Gene Family AT1G20160 50.5 7.1e-121 431.4
Cam01g2607 . 9 832 Subtilisin-like Serine Gene Family AT1G30600 65.2 1.0e-309 1059.3
Cam07g0835 . 56 775 Subtilisin-like Serine Gene Family AT1G32940 54.4 5.7e-227 784.3
Cam07g0835 . 56 775 Subtilisin-like Serine Gene Family AT1G32950 54.1 2.9e-223 771.9
Cam07g0835 . 4 775 Subtilisin-like Serine Gene Family AT1G32960 53.0 5.3e-231 797.7
Cam01g0989 . 121 871 Subtilisin-like Serine Gene Family AT1G62340 58.9 1.4e-250 862.8
Cam02g0319 . 27 767 Subtilisin-like Serine Gene Family AT2G04160 63.5 1.5e-281 965.7
Cam10g0384 . 10 739 Subtilisin-like Serine Gene Family AT2G04160 58.4 1.6e-256 882.5
Cam10g0380 . 26 764 Subtilisin-like Serine Gene Family AT2G04160 58.1 1.9e-249 859.0
Cam10g0388 . 3 737 Subtilisin-like Serine Gene Family AT2G04160 56.1 7.8e-243 837.0
Cam10g0382 . 2 706 Subtilisin-like Serine Gene Family AT2G04160 57.5 1.1e-236 816.6
Cam10g0383 . 5 770 Subtilisin-like Serine Gene Family AT2G04160 53.2 2.1e-235 812.4
Cam01g1175 . 5 769 Subtilisin-like Serine Gene Family AT2G04160 53.2 2.4e-231 798.9
Cam10g0381 . 26 766 Subtilisin-like Serine Gene Family AT2G04160 53.8 1.2e-230 796.6
Cam01g1174 . 1 152 Subtilisin-like Serine Gene Family AT2G04160 55.9 1.3e-43 175.3
Cam03g1524 . 24 763 Subtilisin-like Serine Gene Family AT2G05920 73.5 0.0e+00 1100.5
Cam01g1779 . 22 761 Subtilisin-like Serine Gene Family AT2G05920 55.7 2.1e-232 802.4
Cam08g2112 . 4 729 Subtilisin-like Serine Gene Family AT2G05920 55.8 2.0e-219 759.2
Cam09g0104 . 30 760 Subtilisin-like Serine Gene Family AT2G05920 53.7 2.3e-215 745.7
Cam05g0909 . 27 772 Subtilisin-like Serine Gene Family AT2G05920 51.9 4.0e-215 745.0
Cam02g1236 . 31 764 Subtilisin-like Serine Gene Family AT2G05920 51.5 2.3e-207 719.2
Cam09g0130 . 81 834 Subtilisin-like Serine Gene Family AT2G05920 51.3 2.3e-202 702.6
Cam11g1205 . 15 816 Subtilisin-like Serine Gene Family AT2G19170 81.9 0.0e+00 1340.5
Cam09g0104 . 8 767 Subtilisin-like Serine Gene Family AT3G14067 64.0 1.0e-282 969.5
Cam01g1779 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 54.2 2.6e-225 778.9
Cam03g1524 . 23 761 Subtilisin-like Serine Gene Family AT3G14067 54.1 8.5e-221 763.8
Cam08g2112 . 1 729 Subtilisin-like Serine Gene Family AT3G14067 52.0 1.4e-207 719.9
Cam09g0130 . 62 840 Subtilisin-like Serine Gene Family AT3G14067 50.3 2.5e-204 709.1
Cam07g0362 . 13 162 Subtilisin-like Serine Gene Family AT3G14067 56.3 6.9e-37 152.9
Cam09g0130 . 84 842 Subtilisin-like Serine Gene Family AT3G14240 77.3 0.0e+00 1209.1
Cam02g1236 . 32 772 Subtilisin-like Serine Gene Family AT3G14240 58.8 7.6e-246 847.0
Cam01g1779 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 52.6 3.3e-217 751.9
Cam09g0104 . 29 758 Subtilisin-like Serine Gene Family AT3G14240 51.8 5.0e-213 738.0
Cam05g0909 . 28 768 Subtilisin-like Serine Gene Family AT3G14240 50.1 1.4e-210 729.9
Cam03g1524 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 51.1 6.7e-210 727.6
Cam08g2112 . 1 728 Subtilisin-like Serine Gene Family AT3G14240 50.5 3.7e-200 695.3
Cam07g0362 . 13 159 Subtilisin-like Serine Gene Family AT3G14240 55.1 6.8e-37 152.9
Cam07g0362 . 5 161 Subtilisin-like Serine Gene Family AT3G46840 56.0 9.7e-41 165.6
Cam07g0362 . 5 161 Subtilisin-like Serine Gene Family AT3G46850 51.8 7.7e-38 156.0
Cam07g0652 . 12 570 Subtilisin-like Serine Gene Family AT4G00230 60.8 8.6e-197 683.7
Cam07g0649 . 9 568 Subtilisin-like Serine Gene Family AT4G00230 58.4 9.5e-188 653.7
Cam07g0362 . 6 162 Subtilisin-like Serine Gene Family AT4G00230 56.3 1.1e-42 171.8
Cam07g0835 . 56 773 Subtilisin-like Serine Gene Family AT4G10510 53.1 3.2e-222 768.5
Cam07g0835 . 33 773 Subtilisin-like Serine Gene Family AT4G10520 54.7 4.4e-230 794.7
Cam07g0835 . 33 773 Subtilisin-like Serine Gene Family AT4G10530 52.5 1.4e-217 753.1
Cam07g0835 . 32 775 Subtilisin-like Serine Gene Family AT4G10540 54.2 1.0e-234 810.1
Cam07g0835 . 56 775 Subtilisin-like Serine Gene Family AT4G10550 53.2 4.2e-222 768.1
Cam07g0360 . 58 249 Subtilisin-like Serine Gene Family AT4G15040 53.9 1.9e-51 201.1
Cam01g2607 . 12 832 Subtilisin-like Serine Gene Family AT4G20430 68.3 0.0e+00 1133.2
Cam03g0519 . 1 287 Subtilisin-like Serine Gene Family AT4G21320 76.0 1.0e-126 449.9
Cam07g0835 . 28 772 Subtilisin-like Serine Gene Family AT4G21650 50.3 6.4e-205 711.1
Cam01g1298 . 64 793 Subtilisin-like Serine Gene Family AT4G26330 55.6 2.0e-235 812.4
Cam11g1205 . 10 816 Subtilisin-like Serine Gene Family AT4G30020 81.7 0.0e+00 1337.4
Cam02g1236 . 25 772 Subtilisin-like Serine Gene Family AT4G34980 74.9 0.0e+00 1150.2
Cam09g0130 . 69 842 Subtilisin-like Serine Gene Family AT4G34980 53.2 4.4e-230 794.7
Cam01g1779 . 1 757 Subtilisin-like Serine Gene Family AT4G34980 51.4 3.5e-211 731.9
Cam05g0909 . 9 771 Subtilisin-like Serine Gene Family AT4G34980 50.9 6.0e-211 731.1
Cam03g1524 . 4 757 Subtilisin-like Serine Gene Family AT4G34980 50.4 3.6e-208 721.8
Cam04g1016 . 4 564 Subtilisin-like Serine Gene Family AT5G03620 58.3 1.2e-184 643.3
Cam10g1878 . 929 1457 Subtilisin-like Serine Gene Family AT5G03620 58.5 1.2e-176 616.7
Cam07g0652 . 8 568 Subtilisin-like Serine Gene Family AT5G03620 50.9 2.3e-146 516.2
Cam07g0649 . 5 566 Subtilisin-like Serine Gene Family AT5G03620 51.5 3.0e-146 515.8
Cam07g0367 . 13 543 Subtilisin-like Serine Gene Family AT5G03620 51.7 6.2e-144 508.1
Cam07g0360 . 36 249 Subtilisin-like Serine Gene Family AT5G03620 51.8 3.0e-53 206.8
Cam07g0362 . 6 159 Subtilisin-like Serine Gene Family AT5G03620 59.7 9.9e-49 191.8
Cam06g0921 . 291 1050 Subtilisin-like Serine Gene Family AT5G19660 79.5 0.0e+00 1272.3
Cam01g2607 . 34 612 Subtilisin-like Serine Gene Family AT5G44530 70.8 7.5e-244 840.1
Cam01g2470 . 77 781 Subtilisin-like Serine Gene Family AT5G45640 52.9 5.6e-201 698.0
Cam01g2470 . 23 781 Subtilisin-like Serine Gene Family AT5G45650 58.3 1.4e-250 862.8
Cam05g0909 . 27 770 Subtilisin-like Serine Gene Family AT5G51750 73.8 0.0e+00 1156.4
Cam01g1779 . 13 761 Subtilisin-like Serine Gene Family AT5G51750 52.2 2.6e-230 795.4
Cam03g1524 . 22 761 Subtilisin-like Serine Gene Family AT5G51750 51.4 4.2e-220 761.5
Cam08g2112 . 1 729 Subtilisin-like Serine Gene Family AT5G51750 52.6 3.6e-219 758.4
Cam07g0360 . 34 249 Subtilisin-like Serine Gene Family AT5G58820 51.8 3.0e-55 213.8
Cam07g0362 . 15 161 Subtilisin-like Serine Gene Family AT5G58820 56.5 2.1e-37 154.5
Cam07g0362 . 15 161 Subtilisin-like Serine Gene Family AT5G58830 53.1 3.3e-38 157.1
Cam07g0360 . 34 249 Subtilisin-like Serine Gene Family AT5G58840 51.6 2.7e-56 216.9
Cam07g0362 . 15 162 Subtilisin-like Serine Gene Family AT5G58840 57.4 1.4e-41 167.9
Cam07g0360 . 35 249 Subtilisin-like Serine Gene Family AT5G59090 53.9 4.8e-56 216.5
Cam07g0362 . 15 161 Subtilisin-like Serine Gene Family AT5G59090 53.1 2.6e-38 157.5
Cam07g0362 . 15 159 Subtilisin-like Serine Gene Family AT5G59100 55.2 2.7e-38 157.5
Cam07g0360 . 36 249 Subtilisin-like Serine Gene Family AT5G59120 50.9 9.9e-54 208.8
Cam07g0362 . 15 161 Subtilisin-like Serine Gene Family AT5G59120 55.1 1.9e-41 167.9
Cam07g0362 . 4 161 Subtilisin-like Serine Gene Family AT5G59130 54.4 9.1e-39 159.1
Cam05g2385 . 37 734 Subtilisin-like Serine Gene Family AT5G59190 50.6 8.2e-191 664.1
Cam01g0099 . 404 1101 Subtilisin-like Serine Gene Family AT5G59190 50.4 2.2e-188 656.0
Cam07g0367 . 34 709 Subtilisin-like Serine Gene Family AT5G59190 50.1 2.9e-180 629.0
Cam07g0360 . 45 249 Subtilisin-like Serine Gene Family AT5G59190 55.8 4.5e-56 216.5
Cam07g0362 . 12 161 Subtilisin-like Serine Gene Family AT5G59190 56.7 6.5e-39 159.5
Cam01g1175 . 13 772 Subtilisin-like Serine Gene Family AT5G59810 59.2 1.1e-260 896.3
Cam02g0319 . 10 767 Subtilisin-like Serine Gene Family AT5G59810 58.6 3.5e-259 891.3
Cam10g0384 . 741 1470 Subtilisin-like Serine Gene Family AT5G59810 61.6 2.8e-256 881.7
Cam10g0380 . 1 764 Subtilisin-like Serine Gene Family AT5G59810 55.4 1.8e-234 809.3
Cam10g0381 . 9 766 Subtilisin-like Serine Gene Family AT5G59810 55.2 1.1e-233 806.6
Cam10g0388 . 3 737 Subtilisin-like Serine Gene Family AT5G59810 55.3 3.7e-232 801.6
Cam10g0383 . 1 772 Subtilisin-like Serine Gene Family AT5G59810 53.7 1.8e-226 782.7
Cam10g0382 . 1 706 Subtilisin-like Serine Gene Family AT5G59810 55.9 6.7e-226 780.8
Cam01g1173 . 2 189 Subtilisin-like Serine Gene Family AT5G59810 62.2 7.5e-60 229.2
Cam01g1174 . 8 144 Subtilisin-like Serine Gene Family AT5G59810 59.9 5.2e-45 179.9
Cam01g1779 . 8 762 Subtilisin-like Serine Gene Family AT5G67360 72.2 0.0e+00 1104.0
Cam08g2112 . 1 730 Subtilisin-like Serine Gene Family AT5G67360 66.3 3.9e-287 984.2
Cam03g1524 . 27 762 Subtilisin-like Serine Gene Family AT5G67360 56.3 2.7e-232 802.0
Cam09g0104 . 8 759 Subtilisin-like Serine Gene Family AT5G67360 56.2 4.4e-230 794.7
Cam05g0909 . 11 769 Subtilisin-like Serine Gene Family AT5G67360 53.5 3.5e-227 785.0
Cam09g0130 . 62 837 Subtilisin-like Serine Gene Family AT5G67360 51.6 7.8e-211 730.7
Cam02g1236 . 12 767 Subtilisin-like Serine Gene Family AT5G67360 51.4 1.0e-210 730.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008558 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 0 1 1 34