Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1242 ATGGAAACTCGGAGCAGAAAGCGGGCGGAGGCCTCCTCAGCAGCCCCTTCTTCTTCGTCTTCTGGTCCAACAACCCGTTCTACCAAGCGTGCACGTCTCTCTGGTACTTCTCCGTCGAATCTTGCTGCATCCACTCTTTCGATCACAACACGTTCTCGCTCTACCCGAACCCAAGAACCGTCTGCCACCAGTACTCCAATGGACTCGACTAATGAATCATCAGGGTCACGCCGACGCGGGAAGAATTCTGATAAAGAAAACTCGGATAAGGGGAAGGAGAAGGAACACGAGGTTAGAATCGGGGATAGAGAAAGGAATGCTGAGCAGAGCTTTGGGCTAAATATTGAAGGTAGTGGCGGTGGGGAGGATGATGATAACGACAGTGAAGGAGGAATGGGAGTCTTGCAGCAGAATTTATCCACAGCGAGTAGCGCCCTTCAAGGACTTCTCAGGAAACTCGGTGCTGGACTGGATGATTTACTTCCATCTTCTGCAATTGCATCGGCTTCATCCTCACAGCAGAGAGGACGGCTTAAGAAGATCTTATCTGGGTTGAGAGCGGATGGAGAAGAAGGGAGGCAGGTTGAGGCATTGACACAGCTATGTGAGATGCTCTCAATCGGAACTGAGGAGTCTCTAAGTACTTTCTCTGTTGATTCCTTCGTCCCTGTCCTTGTCGGGTTACTTAATCACGAAAGCAATCCTGATATAATGCTTCTAGCGGCTAGGGCACTAACCCATCTGTGCGATGTCCTCCCTTCATCATGTGCTGCTGTCGTGCATTATGGTGCTGTTTCCTGCTTCTGTGCGAGATTGCTGACTATAGAATACATGGACCTAGCTGAACAGTCCCTGCAAGCTTTAAAGAAGATATCCCAGGAACACCCTACTGCTTGCCTGCGGGCTGGTGCTCTTATGGCCGTGCTTTCATATTTAGATTTCTTCTCTACAGGAGTTCAGCGAGTCGCATTGTCCACTGCTGCTAATATGTGCAAGAAGCTTCCTTCGGATGCAGCTGACTTTGTGATGGAAGCTGTTCCCCTGCTGACAAACCTTCTTCAGTATCATGATGCAAAAGTGTTGGAGCATGCTTCAGTTTGTTTGACTCGTATTGCGGAGGCCTTTGCCTCATCTCCGGATAAATTAGATGAACTATGTAACCATGGACTTGTTACTCAAGCTGCCTCACTTATTTCCACCAGCAGTACTGGAGGTGGACAGTCAACTCTTGGCTCAGCTACTTACACAGGATTAATCCGACTTCTTTCCACATGTGCAAGTGGCTCTGCCTTAGGTGCAAAAACTTTGCTGCTTCTTGGGATCAGTGGGATTCTTAAAGATATATTATCTGGTTCTGGCGTGTCTACTAATGCATCTGTTTCACCTGCATTAAATAGACCACAAGAGCAGATTTTTGAGATAGTCAACTTGGCAAATGAGCTTCTACCTCCTCTACCTCAAGGAACTATTTCCTTTCCGCCCAACTTTAATTTGTTTGTGAAAGGACCTGTCATCAAGAAGCCATCTACTAGCGGTTCTGTGAAAGAAGAAGATCCAACTGATAGTGCTCCAGAAGTGTCAGCTCGTGAGAAACTCTTAAAGGATCAGCCTGAGCTCCTCCTCCAGTTTGGAATGGATCTCCTTCCTATTTTAATACAGATCTATGGTTCCAGTGTGAATGGTCCAGTACGTCATAAATGTCTCTCAGGAATTGGAAAATTGATGTACTTCAGCACTCCAGAGATGATACAGTCATTATTGAATGTGACTAATATAGCAAGTTTTCTAGCTGGTGTTTTGGCATGGAAAGATCCACACATTTTGATTCCTGCTCTCCAGATTGCTGAGATTCTTATGGAAAAGCTTCATGAAACATTTTCTAAGATGTTCCTTCGAGAGGGCGTTGTTTATGCTGTTGACCAGCTTATCTTGGCTAATAGCCAAAATACTTCTTCCCAAGCAGCTTCTGTTGAGAAGGATAACAACTCTGCATCTGGAACTTCATCACACACTCGACGTTACAGGCGGCGCAGTGGAAATATGAATTCGGATGGAAGTTCACTGGACGAAAACAAGAATTCTGTTTCTGGAAGTGGTGTTCCACAGGGTTCAGTGGAGGTTCCATCAATAAATTCTAATCTCCGAACTTCTGTAAGTTCCTACGCCAATGCTTTTAAGACTAAGTACTTCCCTTTAGATCCAGGAGATGTTGAAGTTGGAGTTACAGATGATCTCTTACGTTTGAAGAATCTTTGTGTCAAGTTGAATGCTGGTATTGATGATCAGAAGAGTAAATCAAAAGGAAAGTTGAAAGTGTCAGGGTCTCGCCTAGATGATATTATTACAAATAAGGAAGAGTATTTAACTGGCGTGATATCTGAAATGCTAGTTGAATTGGGCAAAGATGATGGTGTTTCCACTTTTGAATTTATTGGTAGTGGTGTTGTTGGAGTTCTGCTTAACTACTTTTCTTGTGGATACTTTTCTAAAGGAAGAATTTCGGAAGGCGAGTTGCCAAAGCTTCGGCAACAAGTGCTTAAAAGGTTTAAATCATTTATTTCTGTTGCCCTTCCTACAAGCATTAATGAGGGGACAGTAACTCCTATGACAGTCTTAGTTCAAAAGCTGCAGAGTGCTTTATCCTCGTTGGAGCGTTTTCCAGTTGTCTTGAGCCATTCTTCTAGATCATCCAGTGGTAGTGCGCGGCTTTCCTCTGGGCTAAGTGTATTATCTCAGCCATTTAAGTTACGACTTTGTCGAGCCCAGGGAGAAAAATCACTTCGTGATTATTCATCAAATATTGTTCTGATTGATCCATTGGCTAGTTTAGCAGCTGTTGAAGAATTTCTGTGGCCTAGAGTTCAGAAAAGTGAATCTGGTCAGAAACCTTCAGCATCTGTTGCAAACTCAGATTCAGGAACTACGCCTCCGGGAAATGTTGCTCCATCAGGGTTAAATTCAACCCCCAGTTCAACCACTCGTCGTTACTCTACTAGGTCTAGATCATCGATGACTATTGGAGAAAGAGCAGGGAAGGAAACTTCACAGGAGAAAAGCACATCAAAGGGGAAGGGGAAAGCTATTCTAAAGCCTGCCTGGGAGGAGAAGAGAGGCTTGCAAACTAGAAGTTCGACTCGTAGAAGAGCCGCTGTGGACAAGGATGCCCAAATGAAGCCAGTAAATGGAGAGACTACATCTGAGGATGAAGAATTGGACCTATCCTCCATCCAGATTGATGATTCTTTAGTGATTGAGGATGATGATATTTCTGATGATGAAGATGATGACCATGATGATGTGCTGCAGGATGACTCTCTTCCTCTTTGTATGCCTGAGAAGGTGCATGATGTCAAATTGGGAGACACAGTTGAAGATGGGGATGCTGGTCCAGCTACAAGTGATGGCCAGATTCATTCTACTTTTGGCTCTAGCAGTAGAGCTGCTACAGTCAGGGGTTCTAATTCTCCTGATCATAGGAGTGGCAATTCTTTTAGTTCGAGGGGAGGTATGTCATTTGCTGCTGCCGCTATGGCTGGGCTTGGACCAGCTAATGGCAGGGGTTTCCGTGGAGGTCGGGATCCACAGGGACGTCCTCTTTTCAGTGGCTCTAATGATAACCCAAAATTACTTTTTTCTTCTGGTGAGAAGCAGCTTGATAGGCATTTGACAATATATCAAGCTGTTCAACGCCAGCTTGTTTTGAATGAAGACGATGATGAGAGGTTTGCCGGTGCTGGCACTGATTTCTTATCTAATGATGGGAGCAGTTTATGGGGCGATATATATACTATCACGTATCAGAGGGCAGATAATCAATCTGAAAGAGCTGCTTTGGCTGGGGAATCAAGCTCCTCAAAATCTAAATCTACCAAATGTGTATCAACATTCAATCCAAATTCAGAGTCCCAATACCATCAAATGTCACTTTTAGATAGTATTTTACAAGGAAAACTTCCATGTGATTTTGACAAATCTAATCCTACATATGATATACTATCTTTATTGCGTGTACTTGAGGGATTGAATCAGCTTGCTCCTCGCTTAAGGGCACAGATTGTGTCGGATCATTTTGCAGAGGGAAAGATCACCACACTTGATGAACTGGGTGGAATTGGTGGAAAGGTTCCACATGAGGAATTTATCAACAGTAAGCTTACTCCCAAATTGGCCCGACAAATTCAGGATGCTCTTGCACTATGCAGTGGGAGTCTTCCCTCGTGGTGTTACCAATTGACTAAGGCATGCCCGTTCTTATTTCCTTTTGAGACCCGCCGACAATATTTCTATTCAACTGCATTTGGGCTGTCACGTGCATTATATCGGCTACATCAGCAGCAAGGAGCTGATGGTCTTGGAACAGTAAATGAACGAGAGGGAAGGGTTGGAAGATTGCAGCGCCAGAAGGTTCGTGTCTCCCGTAATCGTATATTGGATTCTGCTGCGAAAGTTATGGAGATGTATTCTAGCCAGAAGGCTGTTCTTGAAGTAGAATATTTTGGTGAAGTGGGAACTGGATTAGGTCCTACCCTTGAGTTCTACACACTTTTAAGTCATGAATTGCAGAGGGCTGGACTTGGAATGTGGAGGTCTAATTCATTGCGAGAGTCAACAGATAGTGGTGAAGATGGACAACTTAGGAAGGCTAAAGGTGGCTCTAGGCTTACTTCTGATGTGGCCAATATTGATATCATCCAATCTCCTCTTGGGTTGTTTCCTCGACCTTGGCCACCAAATGCTGATTCTTCTGATGGCAGCCAATTTTCGAAGGTTATTGAATATTTCCGGCTTGTTGGTCGTGTGATGGCCAAAGCTCTACAAGATGGAAGACTATTGGATCTACCGCTCTCAACAGCATTTTATAAGCTTGTTCTTGGTCAAGATCTTGATTTACATGATATCCTCTCATTTGACCCTGAGCTTGGGAAGACTTTACAAGAATTGCAGGCTCTTGTTTGCCGGAAACAATATTTAGGATCGATAAATGGTGATAATCAAAATACAATTTCCAACTTGTCTTTCCGTGGGATTCCAGTTGAAGATCTCTGCTTGGATTTTACAGTTCCTGGTTATCCAGACTACGTTTTGAGGCCAGGAGATGAAACTGTTAATATTCATAACTTGGAGGAGTACATATCCTTAGTATTAGATGCGACTGTCAAGACTGGAATAATGCGGCAAATGGAAGCATTTACTGCAGGATTCAATCAGGTATTTGACATCACAGCATTACGCATATTCATTCCTCATGAGTTGGACCATTTACTATGTGGCCGTAGAGAATTGTGGAAGGCCGACACACTTGTCGATCATATTAAATTTGATCATGGATACACAGCCAAGAGTCCTGCAATAGTCAATTTTCTTGAGATTATGGGCGAATTCACACCAGAACAGCAGCGAGCATTCTGCCAGTTTGTTACAGGTGCACCTAGGCTTCCACCAGGTGGCCTTGCAGTGTTAAACCCAAGATTGACTATTGTGAGAAAGCACTCATCAACTGCAACTAACGTAGCAAACAGCGCTACGGGGGCTTCTGAATCAGCAGATGATGATTTGCCTAGTGTCATGACATGTGCCAATTACCTTAAGCTTCCTCCGTACTCGACCAAGGTGCCTTTTGGCGGCCGCCGTCAGAGAGCAGCAGTTCCTTCCTTCTACTTTTGGTTCTTTTTCTTTTTTCTTTTGGAGTTTGTACATTCATATTTTAACCATTCTGTTCATCATGTGCTCCTGTTTATTTGCTCTCTGTTTGTTAGAGCAATGGACGAACAAGAAGCGCAAGCTATGGCTAACGAAGAAGACGATCTCGATCTTCTCCTTTCTCTTCAAGATAAAGTTGATGAAACTCCTCCTGGAACTCCGCCTCATTCCTCAGATCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCTGCGGATATGTCTATCTTCAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCAACTGAAAAGACTGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATCAACTGGTGGCACCTGCTGAGCTTCGCGATCGTTTTTCTGACATTCGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAAACAAGCTCTACAGGGAAAGCTTATTGCATCTGGAAACTTAGTTGTTTAGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCGCTTTTTAACTCTACTGTACGAAAGGATGCAACGGGCATGGGGTTTTCTTTAAGTGTGTATCAACCAAGCCAATTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGAAGGATGGCATTGCTTGTACAACCGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAAATCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCACAAGCCAGAAGGAGTTTACATGGTAGATCCACTAGCTGGTAAAGTGACTTCTAAGAAGCCAGCACAGCCGGTAAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGACAAAGTGACCACCAATTCACACTCACAAGGGAAAAGATTCCTTGCTGAGATCACAGGGAAACTTACTAGTAAAAGTGTAAATAAAGAATTAACCAAACAAAGTCAGCAGAGAATCAGTTCAGAGAAGACGTCAATTGTGAAGTCATCCACCATGAAACTGGATTCAAGAGTTGAAAACCAACAACCAGATCCAAAAAGAAAGAAAACCGACCATACTCCGGTAGACAAAACCACAAAAGAAACAGGAAAGATGATAGAGTTAGATTATGTTAGTTCAGATGATGATATCGACCTTATATTCACCCGATAA 7041 43.62 METRSRKRAEASSAAPSSSSSGPTTRSTKRARLSGTSPSNLAASTLSITTRSRSTRTQEPSATSTPMDSTNESSGSRRRGKNSDKENSDKGKEKEHEVRIGDRERNAEQSFGLNIEGSGGGEDDDNDSEGGMGVLQQNLSTASSALQGLLRKLGAGLDDLLPSSAIASASSSQQRGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSTGGGQSTLGSATYTGLIRLLSTCASGSALGAKTLLLLGISGILKDILSGSGVSTNASVSPALNRPQEQIFEIVNLANELLPPLPQGTISFPPNFNLFVKGPVIKKPSTSGSVKEEDPTDSAPEVSAREKLLKDQPELLLQFGMDLLPILIQIYGSSVNGPVRHKCLSGIGKLMYFSTPEMIQSLLNVTNIASFLAGVLAWKDPHILIPALQIAEILMEKLHETFSKMFLREGVVYAVDQLILANSQNTSSQAASVEKDNNSASGTSSHTRRYRRRSGNMNSDGSSLDENKNSVSGSGVPQGSVEVPSINSNLRTSVSSYANAFKTKYFPLDPGDVEVGVTDDLLRLKNLCVKLNAGIDDQKSKSKGKLKVSGSRLDDIITNKEEYLTGVISEMLVELGKDDGVSTFEFIGSGVVGVLLNYFSCGYFSKGRISEGELPKLRQQVLKRFKSFISVALPTSINEGTVTPMTVLVQKLQSALSSLERFPVVLSHSSRSSSGSARLSSGLSVLSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAVEEFLWPRVQKSESGQKPSASVANSDSGTTPPGNVAPSGLNSTPSSTTRRYSTRSRSSMTIGERAGKETSQEKSTSKGKGKAILKPAWEEKRGLQTRSSTRRRAAVDKDAQMKPVNGETTSEDEELDLSSIQIDDSLVIEDDDISDDEDDDHDDVLQDDSLPLCMPEKVHDVKLGDTVEDGDAGPATSDGQIHSTFGSSSRAATVRGSNSPDHRSGNSFSSRGGMSFAAAAMAGLGPANGRGFRGGRDPQGRPLFSGSNDNPKLLFSSGEKQLDRHLTIYQAVQRQLVLNEDDDERFAGAGTDFLSNDGSSLWGDIYTITYQRADNQSERAALAGESSSSKSKSTKCVSTFNPNSESQYHQMSLLDSILQGKLPCDFDKSNPTYDILSLLRVLEGLNQLAPRLRAQIVSDHFAEGKITTLDELGGIGGKVPHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLHQQQGADGLGTVNEREGRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHELQRAGLGMWRSNSLRESTDSGEDGQLRKAKGGSRLTSDVANIDIIQSPLGLFPRPWPPNADSSDGSQFSKVIEYFRLVGRVMAKALQDGRLLDLPLSTAFYKLVLGQDLDLHDILSFDPELGKTLQELQALVCRKQYLGSINGDNQNTISNLSFRGIPVEDLCLDFTVPGYPDYVLRPGDETVNIHNLEEYISLVLDATVKTGIMRQMEAFTAGFNQVFDITALRIFIPHELDHLLCGRRELWKADTLVDHIKFDHGYTAKSPAIVNFLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPRLTIVRKHSSTATNVANSATGASESADDDLPSVMTCANYLKLPPYSTKVPFGGRRQRAAVPSFYFWFFFFFLLEFVHSYFNHSVHHVLLFICSLFVRAMDEQEAQAMANEEDDLDLLLSLQDKVDETPPGTPPHSSDLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKTGKTNRSKASNDVSIEKFSGLRMRNQLVAPAELRDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPSQLLKMGTSDDYGVCKGKKKDGIACTTVINRRRGIYCKYHKSKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPAQPVKLLSVEGLKRALSNADKVTTNSHSQGKRFLAEITGKLTSKSVNKELTKQSQQRISSEKTSIVKSSTMKLDSRVENQQPDPKRKKTDHTPVDKTTKETGKMIELDYVSSDDDIDLIFTR 2346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24610580 24629868 + CaPI482276_02g012420.1 Cam02g1242 120984

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1242 2346 MobiDBLite consensus disorder prediction 508 528 - -
Cam02g1242 2346 FunFam HECT ubiquitin protein ligase family protein KAK 171 485 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 956 1167 - -
Cam02g1242 2346 CDD HECTc 1467 1870 IPR000569 GO:0004842(InterPro)
Cam02g1242 2346 Pfam MCM10 OB-fold 2012 2138 IPR055065 -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1275 1294 - -
Cam02g1242 2346 Pfam Primase zinc finger 2141 2183 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
Cam02g1242 2346 MobiDBLite consensus disorder prediction 680 708 - -
Cam02g1242 2346 Gene3D Hect, E3 ligase catalytic domain 1762 1874 - -
Cam02g1242 2346 FunFam E3 ubiquitin-protein ligase UPL3 1408 1652 - -
Cam02g1242 2346 Pfam HECT-domain (ubiquitin-transferase) 1583 1870 IPR000569 GO:0004842(InterPro)
Cam02g1242 2346 SUPERFAMILY Hect, E3 ligase catalytic domain 1459 1870 IPR035983 GO:0004842(InterPro)
Cam02g1242 2346 MobiDBLite consensus disorder prediction 2272 2325 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 74 106 - -
Cam02g1242 2346 Gene3D - 179 660 IPR011989 -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1945 1971 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1532 1551 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 2272 2301 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1109 1123 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 511 528 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 2302 2325 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1 134 - -
Cam02g1242 2346 Gene3D - 2001 2175 IPR012340 -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1011 1054 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 10 73 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1133 1167 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1066 1101 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 957 1010 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 653 708 - -
Cam02g1242 2346 SUPERFAMILY ARM repeat 177 646 IPR016024 -
Cam02g1242 2346 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 135 1870 IPR045322 GO:0000209(PANTHER)|GO:0006511(InterPro)|GO:0043161(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)
Cam02g1242 2346 SMART arm_5 209 250 IPR000225 GO:0005515(InterPro)
Cam02g1242 2346 SMART arm_5 335 373 IPR000225 GO:0005515(InterPro)
Cam02g1242 2346 SMART arm_5 292 332 IPR000225 GO:0005515(InterPro)
Cam02g1242 2346 Gene3D Hect, E3 ligase catalytic domains 1407 1653 - -
Cam02g1242 2346 SMART hect_3 1478 1888 IPR000569 GO:0004842(InterPro)
Cam02g1242 2346 MobiDBLite consensus disorder prediction 653 669 - -
Cam02g1242 2346 MobiDBLite consensus disorder prediction 1183 1207 - -
Cam02g1242 2346 ProSiteProfiles HECT domain profile. 1491 1890 IPR000569 GO:0004842(InterPro)
Cam02g1242 2346 FunFam DNA replication licensing factor mcm10 2002 2176 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1242 K10590 - - csv:101218793 3313.86
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1242 Cam-Chr2:24610580 Cam10g2024 Cam-Chr10:34074061 1.20E-257 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g154 . . . . . Bpe12g00120 . . . . Cma02g00257 Cma20g00754 . Car20g00655 . . . . . . . . . . . . . . . . . . . . Cone10ag1234 . . Chy11g00258 . Blo04g00566 Blo13g00505 Bda15g01035 . Bpe15g00815 . Bma03g00607 Bma08g00752 Sed01g0197 Cmo02g00253 Cmo20g00750 . . . . Cpe16g00315 Cpe05g01375 Bhi10g01854 Tan05g1142 Cmetu11g0032 . Hepe08g0290 . . Cla02g01165 Cam02g1242 Cec02g1251 Cco02g1292 Clacu02g1224 Cmu02g1192 Cre02g1504 . Csa02g01389 . Cme11g00383
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cam08g0007 . 105 657 Core DNA Replication Machinery Family AT4G14700 66.7 1.4e-213 740.0
Cam08g0007 . 105 667 Core DNA Replication Machinery Family AT4G12620 66.7 1.2e-220 763.5
Cam08g2047 . 2 362 Core DNA Replication Machinery Family AT2G37560 65.4 6.0e-142 500.7
Cam07g0479 . 9 410 Core DNA Replication Machinery Family AT2G01120 64.3 6.6e-151 530.8
Cam06g0369 . 3 531 Core DNA Replication Machinery Family AT4G29910 58.0 1.5e-171 599.7
Cam11g0931 . 1 254 Core DNA Replication Machinery Family AT1G26840 68.5 8.0e-92 334.0
Cam09g2299 . 68 864 Core DNA Replication Machinery Family AT1G79150 59.6 6.7e-248 854.0
Cam10g1373 . 8 940 Core DNA Replication Machinery Family AT1G44900 75.6 0.0e+00 1353.6
Cam01g2506 . 62 636 Core DNA Replication Machinery Family AT5G46280 81.0 8.0e-269 922.9
Cam02g0506 . 1 845 Core DNA Replication Machinery Family AT2G16440 76.2 0.0e+00 1153.7
Cam11g0371 . 1 735 Core DNA Replication Machinery Family AT2G07690 78.3 0.0e+00 1113.2
Cam01g2656 . 7 800 Core DNA Replication Machinery Family AT5G44635 73.4 0.0e+00 1163.3
Cam09g0512 . 4 722 Core DNA Replication Machinery Family AT4G02060 85.3 0.0e+00 1219.9
Cam02g2032 . 55 512 Core DNA Replication Machinery Family AT2G29680 61.1 1.5e-157 553.1
Cam02g2032 . 37 482 Core DNA Replication Machinery Family AT1G07270 58.6 4.3e-143 505.0
Cam09g0867 . 1 593 Core DNA Replication Machinery Family AT3G25100 76.2 3.3e-257 884.4
Cam10g2023 . 12 783 Core DNA Replication Machinery Family AT3G09660 72.5 0.0e+00 1081.2
Cam09g1617 . 1 424 Core DNA Replication Machinery Family AT2G14050 80.8 9.9e-199 690.3
Cam02g1242 . 1929 2339 Core DNA Replication Machinery Family AT2G20980 56.4 1.4e-118 423.3
Cam11g1620 . 7 960 Core DNA Replication Machinery Family AT1G77320 50.3 9.5e-257 883.6
Cam09g0265 . 1 192 Core DNA Replication Machinery Family AT1G80190 67.5 1.0e-72 270.0
Cam11g0646 . 664 831 Core DNA Replication Machinery Family AT1G19080 69.0 2.7e-64 241.9
Cam11g0646 . 664 831 Core DNA Replication Machinery Family AT3G55490 69.0 2.7e-64 241.9
Cam05g0170 . 15 164 Core DNA Replication Machinery Family AT5G49010 66.0 1.7e-50 196.1
Cam02g1288 . 1 1538 Core DNA Replication Machinery Family AT5G67100 60.4 0.0e+00 1752.3
Cam04g1197 . 166 783 Core DNA Replication Machinery Family AT1G67630 59.6 2.3e-205 712.2
Cam06g0017 . 1 444 Core DNA Replication Machinery Family AT1G67320 64.5 1.4e-181 632.9
Cam08g0150 . 136 579 Core DNA Replication Machinery Family AT5G41880 65.0 9.7e-177 616.7
Cam01g1553 . 1 1086 Core DNA Replication Machinery Family AT5G63960 80.7 0.0e+00 1797.7
Cam10g1715 . 1 419 Core DNA Replication Machinery Family AT2G42120 76.1 6.3e-197 683.7
Cam06g0017 . 1 444 Core DNA Replication Machinery Family AT1G67320 64.5 1.4e-181 632.9
Cam01g0555 . 1 127 Core DNA Replication Machinery Family AT1G09815 60.8 7.1e-37 150.2
Cam02g2276 . 1 2095 Core DNA Replication Machinery Family AT1G08260 71.6 0.0e+00 2982.6
Cam09g2092 . 68 2104 Core DNA Replication Machinery Family AT1G08260 68.0 0.0e+00 2787.7
Cam02g2276 . 25 2202 Core DNA Replication Machinery Family AT2G27120 68.2 0.0e+00 2948.3
Cam09g2092 . 90 2215 Core DNA Replication Machinery Family AT2G27120 65.1 0.0e+00 2758.8
Cam04g1308 . 1 258 Core DNA Replication Machinery Family AT5G22110 77.9 7.5e-122 434.5
Cam04g1307 . 7 218 Core DNA Replication Machinery Family AT5G22110 59.6 4.5e-58 222.6
Cam02g2330 . 50 974 Core DNA Replication Machinery Family AT5G22010 63.2 1.6e-306 1048.9
Cam10g0345 . 1 331 Core DNA Replication Machinery Family AT1G63160 91.3 2.8e-173 604.7
Cam04g0473 . 88 441 Core DNA Replication Machinery Family AT5G27740 85.3 1.1e-178 622.9
Cam11g1618 . 19 337 Core DNA Replication Machinery Family AT1G21690 81.6 2.1e-144 508.8
Cam08g1021 . 1 363 Core DNA Replication Machinery Family AT1G77470 75.8 1.5e-154 542.7
Cam11g0164 . 26 617 Core DNA Replication Machinery Family AT2G06510 68.6 9.7e-252 866.3
Cam10g0103 . 32 703 Core DNA Replication Machinery Family AT2G06510 50.4 9.8e-196 680.2
Cam06g1696 . 1 623 Core DNA Replication Machinery Family AT5G08020 68.3 5.7e-249 857.1
Cam10g0103 . 10 811 Core DNA Replication Machinery Family AT5G45400 50.3 2.3e-227 785.8
Cam06g1696 . 1 618 Core DNA Replication Machinery Family AT5G61000 66.1 2.7e-241 831.6
Cam10g0103 . 5 797 Core DNA Replication Machinery Family AT4G19130 53.3 3.7e-224 775.0
Cam03g1804 . 1 404 Core DNA Replication Machinery Family AT5G26680 82.5 1.0e-188 656.4
Cam05g0314 . 30 608 Core DNA Replication Machinery Family AT1G08840 62.1 3.7e-203 705.7
Cam07g1587 . 1 297 Core DNA Replication Machinery Family AT2G25100 66.7 5.0e-115 411.0
Cam02g2230 . 2 762 Core DNA Replication Machinery Family AT1G08130 69.2 1.1e-297 1019.2
Cam02g2230 . 162 762 Core DNA Replication Machinery Family AT1G49250 69.1 2.5e-242 835.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003449 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 2 2 2 1 1 3 4 2 48