Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1259 ATGGGAGCTTCCATTCAAGTGTTAATTGCTATGCGGATATTTTGGAGGGTTGTTTGGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACCGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCAGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACATATTGTAGTCTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCCATCAAAAAACCCATACTGAGTGCTGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAATGGAAGTGCAAGAAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCTGATTTGAAGAAGATTGACCGTGGTGTACGACGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTCGACTCAAACCTTGTAGCTTCCAACAGAGATAAAGTGGAGACAGGCATCAATCCTTTTACTATACACTATACTGAAACTCATCAGATGAATACAGATAACATCTTCACAGAAGACAATACGGGTCAAATACGTCTTTTGAAGGGAGAAGAAGAAGCTGTTGCTGCTGCTTTAGCTTTGGCCAACAAAGAAATGGGTTGTGTTGCCTCAAAGTTAGAGGAAGAAGAAGAAGTAGTTTCCATTTGTAGAGAAAGAAAACGCCACTTAAAGTTAGCTGTTGAGAGAAGGTATGCTCTTGCAGAGGCACATTGTAAATATTGTCAAGCTTTATATGCTGTTTCAGCTGCCATTAAGCTATTTGTAGCTCGCCATTCTTCTCCTTCTCCTTTCCTCATTACATTCCCTCCTCCGTGTTCTCCTTCTCCTCCTCCTTCAGAAAAAGTTATAACCAATCCAATGTTTCTTCAGCAAATGCCTTCTGATTCCACCCATGAAGCCATACCTGCTTGCCCTTCATGTGTTTCTTCTTCTTCAACCTCTACAGAATCCTCCATTGAAGAAAGAGAAGAAGAATCAGTAGAAGAGGAGAGGATTGAACAAGTCCCTCCATATTTCTACATGCAAATGCCACCCCCAATGCCATCTCCTCAGAGGGAGTTTGGATGGGATTTCTTCAATCCATTTGACACAATGAGGACCGATGTCATCGGCGAATATCGTGAGGACGAGCTCAGGATGGTGAGGGAGGAAGAAGGAATTCCAGAGCTGGAAGAGGCTGAGGTAGAGAAAGAAGAGCAAAACCAGAGAGTTGTGGCTGTTGCTGAGGAGGAAGATGTTGGAGCTTTTAAAGAGCAGAGGAATGGAGTTGAGATGGTTAAAGTTGGAGAGAAGGAAGATGAAGGTCAAATGAGGCAGAAAGGGCTAACAGTCATTGATACACCAGTGGAAGGAAGGGAACTTTTGGAAGCATTGCAAGATGTTGAGGATTATTTCATTAGGGCTTATGATTCTGGAATTGATGTTTCTAGGATGTTAGAGGCCAACAAAATTCAGCTTCAGTCTGGTTTAGAAGAAATAAAAGAGAACTCGACAAAACTCATCCAAGCAATAACTTGGCACCGGTCTGCTTCGGGCAAGCCTTCATCATGTAAGAGTCTAGTAGCATCAAGTTCGAAAGGTTCTTCAGCATGGACAGAGTTTAAAAATGAGCTGTTCGATGATTACGACGTAATGGACTCAGGAAGCCATTCATCGACTCTCGGGCGACTATATGCTTGGGAGAAGAAGCTCTACGAAGAGGTCAAGGCTGGGGACAGCATGCGCAAACTGTACGAGAAAAGGTGTTCACGACTAAGAAACCAGGACATTAAAGGGGACAATGGAGTTGCTACTGATAAAACTCGAGTTGCAGTAAAAGATTTATATGCCAGGATATTGGTCGCCATTCGGAGTGCTGAATCAATCTCGACGAGAATTGAGAAACTAAGAGACGACGAGCTACAACCTCAGATTGTCGAGCTGTTAAAAGGCTTAACAAGAACATGGAAAATCATGATGGAAGTTCATGAAACCCAGAAAAGGATTATCCTTGAAGTGAAGACTTATTCCTGCCATTCCTATCTGAAATTCTGTAACGAATCTCATCGTCTTGCAACTCTTCAGCTTGGGGCCGAGCTTCAGAATTGGCGTTCGTGTTTTTCAAAATACGTTGAATCACAAAAGGCTTATGTTGAAGCTCTCCATGGATGGCTGACCAAGTTTGTAGTGCCTGAGGTTGAGTTCTATTCTCGGGGTCGAGCGTCGGCTGTGCCTTATGGGCTGCACGGACCTCCATTGCTTTCAATCTGCCATGATTGGCTATCTTCCATGGAAAAGTTACCTGATAAACCAGTAGCCTTTGCATTGAAAAGCTTTGCAAAGGATATGAAAGCTCTATCAGATAAACAGATGGAGGAGCAGCACCAAAAGAGAAGAGTTGAAAGTCTCGGAAAGGAACTCGACCGAAGGATCCTGTCACTCCAGAAAACGGAGAACAAGTTCTTCGAGTTCAACTTTACCGAGATGAAATCAGAGCTGGAAATGGAAAATCAGAACGAGTACTTAACAGAAAAGAAAGATCAGCTGGACATGTTCAGGAAGAAGCTTGATTTGGAGAAGGAAAAACACAATAACTGCATTCAAGAAGCACAGAGTATTACATTAAATGGAATCCAAACAGGGTTTTCTGCAGTTTTTGAATCCTTATCAGAATTCTCCAAGGCATCCCAAATAATTTCTGAGACTCGAGGCACCATCAATGGCAGTTGCAAAGCTTTGTCTTCATGTATGCGGTTTGATTCCATTATTGTGGTGGGGCACGTGAAAACAGAGTCTGAAACTAGCAAAAAAACAAGAGGCCGTCCTGTATTACAGAAAGAGCTGAAGGATCTCGATAAGCCATTAGCCAATGGTCGCCACCTGACACTTGTCTTTCAACAACGGGGTACAGGAAGGCATTTGGAGGGTGGACCGTTCTTACCAAATAGCTTTAAGTGA 3561 43.75 MGASIQVLIAMRIFWRVVWDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVASNRDKVETGINPFTIHYTETHQMNTDNIFTEDNTGQIRLLKGEEEAVAAALALANKEMGCVASKLEEEEEVVSICRERKRHLKLAVERRYALAEAHCKYCQALYAVSAAIKLFVARHSSPSPFLITFPPPCSPSPPPSEKVITNPMFLQQMPSDSTHEAIPACPSCVSSSSTSTESSIEEREEESVEEERIEQVPPYFYMQMPPPMPSPQREFGWDFFNPFDTMRTDVIGEYREDELRMVREEEGIPELEEAEVEKEEQNQRVVAVAEEEDVGAFKEQRNGVEMVKVGEKEDEGQMRQKGLTVIDTPVEGRELLEALQDVEDYFIRAYDSGIDVSRMLEANKIQLQSGLEEIKENSTKLIQAITWHRSASGKPSSCKSLVASSSKGSSAWTEFKNELFDDYDVMDSGSHSSTLGRLYAWEKKLYEEVKAGDSMRKLYEKRCSRLRNQDIKGDNGVATDKTRVAVKDLYARILVAIRSAESISTRIEKLRDDELQPQIVELLKGLTRTWKIMMEVHETQKRIILEVKTYSCHSYLKFCNESHRLATLQLGAELQNWRSCFSKYVESQKAYVEALHGWLTKFVVPEVEFYSRGRASAVPYGLHGPPLLSICHDWLSSMEKLPDKPVAFALKSFAKDMKALSDKQMEEQHQKRRVESLGKELDRRILSLQKTENKFFEFNFTEMKSELEMENQNEYLTEKKDQLDMFRKKLDLEKEKHNNCIQEAQSITLNGIQTGFSAVFESLSEFSKASQIISETRGTINGSCKALSSCMRFDSIIVVGHVKTESETSKKTRGRPVLQKELKDLDKPLANGRHLTLVFQQRGTGRHLEGGPFLPNSFK 1186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24827992 24840495 + CaPI482276_02g012590.1 Cam02g1259 121001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1259 1186 ProSiteProfiles PPM-type phosphatase domain profile. 35 343 IPR001932 -
Cam02g1259 1186 SUPERFAMILY PP2C-like 47 344 IPR036457 -
Cam02g1259 1186 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169(InterPro)
Cam02g1259 1186 MobiDBLite consensus disorder prediction 507 524 - -
Cam02g1259 1186 SMART PP2C_4 27 341 IPR001932 -
Cam02g1259 1186 FunFam Phosphatase 2C family protein 24 353 - -
Cam02g1259 1186 Pfam Protein of unknown function (DUF632) 662 985 IPR006867 -
Cam02g1259 1186 PANTHER UNCHARACTERIZED 407 1097 - -
Cam02g1259 1186 Pfam Protein of unknown function (DUF630) 407 466 IPR006868 -
Cam02g1259 1186 Gene3D - 25 355 IPR036457 -
Cam02g1259 1186 CDD PP2Cc 36 343 IPR001932 -
Cam02g1259 1186 Coils Coil 598 618 - -
Cam02g1259 1186 Pfam Protein phosphatase 2C 66 311 IPR001932 -
Cam02g1259 1186 Coils Coil 1043 1063 - -
Cam02g1259 1186 MobiDBLite consensus disorder prediction 507 539 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1259 Cam-Chr2:24827992 Cam10g0048 Cam-Chr10:2101953 4.00E-153 dispersed
Cam01g2092 Cam-Chr1:33936969 Cam02g1259 Cam-Chr2:24827992 1.40E-51 transposed
Cam02g0702 Cam-Chr2:8315160 Cam02g1259 Cam-Chr2:24827992 1.50E-109 transposed
Cam02g2485 Cam-Chr2:37294080 Cam02g1259 Cam-Chr2:24827992 2.30E-56 transposed
Cam07g0986 Cam-Chr7:24087307 Cam02g1259 Cam-Chr2:24827992 5.80E-62 transposed
Cam11g1218 Cam-Chr11:24272624 Cam02g1259 Cam-Chr2:24827992 5.40E-66 transposed
Cam02g0416 Cam-Chr2:4896996 Cam02g1259 Cam-Chr2:24827992 1.00E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1259 - - - 0.0