Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1267 | ATGAGAGCTCATCGTTTGAGCTTCTTCACTTCCTTTATATTTTTATTCCCTACATTCATCACAGCCACAGGCTTCACGCTTCTCCACGATTCCTCCATTTCCTACAGGAGAATTCTGCATCAGCCGCTCTTTCCGGTTGCCTCTGAGCCGCCGCCTGACATTGACTTGTCTCCACCGCCCCCGCCGCCGGATTCTCCTTCCGACGATCAGCCGTTTTTCCATGAGCTGCCCACCAGTCCAGATCAGAGTCAACCTCCTCCTTCCTCATCTAATGGAACTATGCCAATCCCTGCCTCTACGGCGCAACCGTCCAAGCCCACCAAGACTGTTGCAATTGCCATTTCCGTTGGGATTGTGACTTTGGGGATGCTTTCAGCTCTCGCTTTCTTTTTGTATCGTCACCGTGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAATAATCCGGAGAGATTTGTGGAGGACTCGAGAGCGCCGCCCTCGAGTTTTTTCTATATCGGAACTGTTGAGCCGAGTCAGAGCTCTATTGTGGAGCAGAATGGTGCCAATGGTGCTAACAGTTCGCCTTATCGCAAGTTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCAGAGTTGCAGCCACTGCCGCCACTGCCAAAACCACCGGTGGCTATGTCGCCTCCGGCTTTGTCGTCTTCCGATGAGGAAAGCCAGGACACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCACGATGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAGAGCTGTTCCACGGCAAGTTTCAAGAATGACCATATGAATTCCAATCCTCCTCCCATCCCTCATTCCAAAAGGACGTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGCACTTCGTCTCAGCCTCAGCCTCAGCCACCGCCGCCGCCGCCTCCTCCACCGCGTCCGTTTGATGATTTTCGCGAAATTCCGAATTCGAAAGAGACAATGCCTTTCTCGTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCAACCACATTTCCTCAAGTTCCGCAACCTGCTGTAGCTCCACCTCCACCTCCACCTCCGCCTCCGCCGCCCCCACCCCCACCCCCACCCCCACCTCCACCTCCGCGACCACCGGCGCGTCCGGCCTCCTATTCAACGCCACAAAAACTAGGGTTATCAGAAACCAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAGTCACAATCCTACTCAACAGCGAGGTCAAACTCTTCCCCGAAATCCACACCGAGTTCTGTGACAACAAATTCTGCTAAAGAAGACGTTGCCCCGAGGATTAATTCTATGGAGAGGCTCGAAGCAGAGGATGCAGAAGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTGTTCGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATAGGGTATTGGACCCAAAAAAGTCTCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTAAGGAAATCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTGAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCGGTTCTTAAGACAGGAAATAGGATGAATGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTCGATATAAAGGGAACGGATGGGAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTTCGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTAAAAAAAGCGGCAGGGATGGACTCAGACGTCTTGAGCAGTTATGTCACAAAGCTCGAGATGGGGCTTGAAAAAGTAAGGTTGGTTTTGCAATTTGAAAGGCCAGGAATGCAGGGAAAATTCTTCAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATTAAAGCTGACGAAAGGCAAGCTTTATCGCTTGTGAAAGCAGTCACAGAGTATTTCCATGGTGATGCTGCTAAGGAGGAAGCACATCCCTTCCGAATATTCATGATCGTTCGGGATTTCCTAACTGTACTGGATCAAGTATGCAAAGAAGTTGGGAGAATGCAAGACGGAGTAATGGTTGGTGCTGCCAGATCCTTTCGGATATCTGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAACGTCAGACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA | 2757 | 48.46 | MRAHRLSFFTSFIFLFPTFITATGFTLLHDSSISYRRILHQPLFPVASEPPPDIDLSPPPPPPDSPSDDQPFFHELPTSPDQSQPPPSSSNGTMPIPASTAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFVEDSRAPPSSFFYIGTVEPSQSSIVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESQDTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNPPPIPHSKRTSPKSRFSVSSTKRTSSQPQPQPPPPPPPPPRPFDDFREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSTTFPQVPQPAVAPPPPPPPPPPPPPPPPPPPPPPRPPARPASYSTPQKLGLSETRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSVTTNSAKEDVAPRINSMERLEAEDAEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRSQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFERPGMQGKFFNSMKTFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTVLDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP | 918 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24953825 | 24957764 | + | CaPI482276_02g012670.1 | Cam02g1267 | 121009 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1267 | 918 | Coils | Coil | 814 | 834 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 228 | 308 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 208 | 224 | - | - | |
Cam02g1267 | 918 | SMART | it6_source | 472 | 882 | IPR015425 | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 49 | 106 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 462 | 477 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 410 | 460 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - | |
Cam02g1267 | 918 | Gene3D | Formin, FH2 domain | 466 | 878 | IPR042201 | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 49 | 68 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 372 | 406 | - | - | |
Cam02g1267 | 918 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 472 | 893 | IPR015425 | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 198 | 477 | - | - | |
Cam02g1267 | 918 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 389 | 878 | - | - | |
Cam02g1267 | 918 | MobiDBLite | consensus disorder prediction | 309 | 327 | - | - | |
Cam02g1267 | 918 | PANTHER | FORMIN-RELATED | 354 | 912 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Cam02g1267 | 918 | Pfam | Formin Homology 2 Domain | 477 | 867 | IPR015425 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g1796 | Cam-Chr1:31535328 | Cam02g1267 | Cam-Chr2:24953825 | 3.00E-35 | dispersed | |
Cam02g1267 | Cam-Chr2:24953825 | Cam07g0241 | Cam-Chr7:3554759 | 1.80E-145 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1267 | K28090 | - | csv:101208011 | 1434.47 |