Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1268 ATGGGAGGAAGTAGAAAATTGAGCTTTGTTGTGGTTTTTGTTATTGTTTTGACATCGTTGTTTGCGGTTGTTCCGACAGCCGAAGCACAGCTCCGACGAGATTTCTACGCAGATGTCTGCCCTAATGTGGAGTCCATAGTCCGACAGGCTGTAGCCAAGAAGTTCAAACAAACATTCGTCACTGTTCCAGCTACCCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCAGTGATGATTGCTTCAACTGGAGGTAACACCGCAGAGAAGGATCATCCTGACAATCTTTCATTGGCCGGAGATGGATTTGATACTGTCATCAAAGCCAAAGCGGCGGTTGATGCTGTGGCAGGTTGTAAGAATAAAGTCTCTTGCGCCGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCTAGAGGACCTTCTTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTTGTTTCAAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAGCTCAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAACTGATATGATTGCTCTCTCTGCTGCGCACACCGTAGGATTCTCTCACTGCAGCAAATTCGCAAATCGGATATACAATTTCAGCCGTACAAATGGAGTTGATCCAACGCTGAACGCCACATACGCAACCATGCTTCAAGGCATGTGCCCCAAAAACGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACTAGGTTCGACAATATGTACTTCAAGAATCTCCAACAAGGAATGGGCCTTTTCACTTCCGACCAAATTCTTTTCACTGATTCAAGGTCCAAGCCCACTGTCAAGATTTGGGCCCATAGTGGACAAACCTTCTACACGGCCTTCGTTGATGCCATGACCAAGTTGGGTCGGGTCGGAGTCAAGACCGGATCCAATGGCAACATCCGTACTGATTGTGGTGCTTTCAACTCTTGA 1005 46.57 MGGSRKLSFVVVFVIVLTSLFAVVPTAEAQLRRDFYADVCPNVESIVRQAVAKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASTGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVAGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKFANRIYNFSRTNGVDPTLNATYATMLQGMCPKNVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQILFTDSRSKPTVKIWAHSGQTFYTAFVDAMTKLGRVGVKTGSNGNIRTDCGAFNS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24974905 24977161 + CaPI482276_02g012680.1 Cam02g1268 121010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1268 334 PANTHER - 13 333 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 Gene3D - 34 333 - -
Cam02g1268 334 FunFam Peroxidase 171 312 - -
Cam02g1268 334 Gene3D Peroxidase, domain 2 171 312 - -
Cam02g1268 334 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Cam02g1268 334 ProSiteProfiles Plant heme peroxidase family profile. 30 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cam02g1268 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 Pfam Peroxidase 47 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g1268 334 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g1268 334 FunFam Peroxidase 34 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1788 Cam-Chr1:31443952 Cam02g1268 Cam-Chr2:24974905 4.30E-142 dispersed
Cam02g1268 Cam-Chr2:24974905 Cam11g0735 Cam-Chr11:9140161 2.10E-115 dispersed
Cam02g1268 Cam-Chr2:24974905 Cam09g1921 Cam-Chr9:33907442 2.20E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1268 K00430 - csv:101208254 583.178