Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1282 | ATGGAAGCTAATATTCATGATCTTAAGGTGCCTCTAAATCCACGGGGCCTCAATAATGAAGACAGAGAAGTAGAAATCATAGAAGCCGGAGGATTCCCCGGCGACGAATTTTCAGAACAAGGCATTGCAGCAACATGTCGTCTAAGAGTTCCAAGAATAGGCTGCCCAGCCAAAGTCCGTTCTCTTCAAAAAGCCCTAGCCATGGTCCACGGCGTAAAACGAGCAACCGTAGTTCTCGAAATCGAAGAAGCCAAAGTCCTCTTCGATCCAAATTTAACCACAGAGACCCTAATCCTCACAGAAATCGACAATTCCGGCTTCGAAGCCGAGCTCATCTCCGCTGCAGACGAAGCCTACAAAGTTCACATAAAACTTAATCGAGCGAGCCCCGGAGACATGCCCGCCATCAAATCCTCTCTCGAGCAAGCTCCGGGAGTGAACTGTGTGGAAATGGAGGCGATAGGGCGGATGGTAGCCATCGACTACGACCCTGATCGGACGGGTCCAAGGTGCCTTCTGCAGTTCCTGGAGAAGTATGGAGCAAGCTTGTATGTGCCTCCGAAGAGAAGAGATGTGGAGCAGCTTCAAGAAGCTTGTGCTTATAGGAATTTGTTCTTGCTGAGCTGCTTGTTTTCTGTTCCAGTGGTGGCTTTTGCAATGGTGCTTCCAATGCTTCCTCCTTATGGAGATTGGTTGAATTTTAGGGTTTGCAGTATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACTCCAGTCCAGTTCCTTGCTGGTCGCAGATTTTATGTAGGATCATACCGTGCATTACAACGGAAATCTGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCTTACTTTTACTCAGTATACATAGTTTTTAAAGCATCCACTTCCAACTCTTTTAAGGGGAAAGATTTCTTTGAGACTAGCTCCATGTTGATCTCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAAGGCAAATCATCAGATGCTTTAGCACAGCTTGCTCATCTTGCTCCTGATACAGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGGTGGAGATTGATACCCAACTCATACAGAGGAATGACATAATTAAGATTGTTCCTGGGGCAAAAGTTCCTGTTGATGGGGTCGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACAGGAGAAGCAAGATCCATTGGCAAATCAACTGGTGATAAGGTTATTGGAGGGACTGTCAATGAAAATGGATGCTTATTTGTTAAAACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTCGTGGAATCGGCTCAGCTATCACGAGCCCCAGCTCAAAAATTAGCAGATCAGATATCAAAGTTCTTTGTTCCTGTTGTTGTTGTGGCAGCATCTGTGACATGGCTGGGATGGTTAATTTGTGGAGAACTTGGTTTATACCCCAAACATTGGATACCAAAAGGCATGGATGAGTTTGAACTTGCCCTGCAATTTGCCATTTCAGTGCTGGTGATTGCATGCCCGTGTGCCCTTGGTTTAGCAACACCGACTGCGATCATGGTTGCGTCGGGAAAAGGTGCTTCTCTAGGTGTGCTCATTAAAGGGGCAAGTGCACTTCAAAATGCATACAAGGTGAAAACAGTAGTTTTTGACAAGACTGGAACTCTGACAATTGGGAGGCCAGAGGTAGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGTGATGTAGCAATAGCAATTGAGTCAAACAGCGAACACCCTCTAGCAAAATCTGTAGTGGAGCATGCAAAGAAAATGAGAAAGAAGTTTGGGGCCCGAAGTGAATGTCGCAAACGCATCCAGAACTTCGAGGTGTTCCCGGGAGAAGGGGTTGGAGGAAGAATTGATAGAAAGACAGTTTTAGTAGGAAACAGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGGTATGTTATAGAAAACGAGCGACTGGCTCAAACATGTGTCTTGGTGGCTATTAATGGCAGGGTAGCAGGAGGTTTTGGTGTTATAGATGCGCCAAAGCCTGGGACTAAAGCTGTCATATCATTTCTTCGTTCGATTGGCATCTCAACCATAATGGTCACCGGAGATAACTGGGCCACAGCCTTCGCGGTTGCAAGAGGGGTCGGGATTAGTGAAGTCTTTGCAGAGATGGATCCAATTGGAAAAGCTAACAAGATTAGATCCTTAAAGACGTCAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAATGACTCACATGCCTTAGCTGCAGCTGATGTCGGTATTGCAATTGGTGCTGGAACAAATATTGCTATTGAAGCAGCTGATATTGTTCTAATGCGAAGCAATTTAGAAGATGTGGTTACTGCTATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATTTGGGCTCTTGGCTACAATATCATCGGCATGCCTATTGCTGCCGGAATCCTATATCCCTTCTTTGGAATCCGACTGCCACCGTGGCTTGCCGGTGCATGTATGGCTGCTTCCTCCCTTAGTGTTGTATGTTCTTCTCTCTTATTGAAATGTTATAGGAGACCCTTGAATTTTCAATCCACTTGA | 2679 | 44.76 | MEANIHDLKVPLNPRGLNNEDREVEIIEAGGFPGDEFSEQGIAATCRLRVPRIGCPAKVRSLQKALAMVHGVKRATVVLEIEEAKVLFDPNLTTETLILTEIDNSGFEAELISAADEAYKVHIKLNRASPGDMPAIKSSLEQAPGVNCVEMEAIGRMVAIDYDPDRTGPRCLLQFLEKYGASLYVPPKRRDVEQLQEACAYRNLFLLSCLFSVPVVAFAMVLPMLPPYGDWLNFRVCSMLTVGMVLKWIFCTPVQFLAGRRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFKGKDFFETSSMLISFILLGKYLEVMAKGKSSDALAQLAHLAPDTACLMTFDDHGNLLSEVEIDTQLIQRNDIIKIVPGAKVPVDGVVISGESNVNESTITGEARSIGKSTGDKVIGGTVNENGCLFVKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADQISKFFVPVVVVAASVTWLGWLICGELGLYPKHWIPKGMDEFELALQFAISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKTVVFDKTGTLTIGRPEVVSVVLFSTFPMQELCDVAIAIESNSEHPLAKSVVEHAKKMRKKFGARSECRKRIQNFEVFPGEGVGGRIDRKTVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCVLVAINGRVAGGFGVIDAPKPGTKAVISFLRSIGISTIMVTGDNWATAFAVARGVGISEVFAEMDPIGKANKIRSLKTSGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFFGIRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLNFQST | 892 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25135663 | 25146612 | + | CaPI482276_02g012820.1 | Cam02g1282 | 121024 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1282 | 892 | ProSiteProfiles | Heavy-metal-associated domain profile. | 44 | 110 | IPR006121 | GO:0046872(InterPro) | |
Cam02g1282 | 892 | CDD | HMA | 48 | 110 | IPR006121 | GO:0046872(InterPro) | |
Cam02g1282 | 892 | Gene3D | - | 43 | 117 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 718 | 728 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 564 | 578 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 794 | 806 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 696 | 707 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 771 | 790 | - | - | |
Cam02g1282 | 892 | PRINTS | P-type cation-transporting ATPase superfamily signature | 400 | 414 | - | - | |
Cam02g1282 | 892 | Pfam | E1-E2 ATPase | 363 | 542 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase 1 signature | 45 | 70 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase 1 signature | 240 | 260 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase 1 signature | 71 | 94 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase 1 signature | 205 | 226 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase 1 signature | 260 | 285 | - | - | |
Cam02g1282 | 892 | FunFam | Probable copper-transporting ATPase HMA5 | 696 | 828 | - | - | |
Cam02g1282 | 892 | NCBIfam | heavy metal translocating P-type ATPase | 277 | 880 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Cam02g1282 | 892 | SUPERFAMILY | Calcium ATPase, transduction domain A | 364 | 450 | IPR008250 | - | |
Cam02g1282 | 892 | SFLD | Haloacid Dehalogenase | 546 | 823 | - | - | |
Cam02g1282 | 892 | Pfam | haloacid dehalogenase-like hydrolase | 560 | 785 | - | - | |
Cam02g1282 | 892 | SUPERFAMILY | HAD-like | 562 | 877 | IPR036412 | - | |
Cam02g1282 | 892 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 566 | 572 | IPR018303 | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 262 | 281 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 314 | 333 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 844 | 858 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 473 | 487 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 748 | 765 | - | - | |
Cam02g1282 | 892 | PRINTS | Copper-transporting ATPase signature | 334 | 352 | - | - | |
Cam02g1282 | 892 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 18 | 888 | - | - | |
Cam02g1282 | 892 | Gene3D | - | 651 | 702 | IPR023299 | GO:0000166(InterPro) | |
Cam02g1282 | 892 | Gene3D | - | 571 | 650 | IPR023299 | GO:0000166(InterPro) | |
Cam02g1282 | 892 | CDD | P-type_ATPase_Cu-like | 205 | 867 | - | - | |
Cam02g1282 | 892 | Gene3D | - | 531 | 827 | IPR023214 | - | |
Cam02g1282 | 892 | NCBIfam | HAD-IC family P-type ATPase | 317 | 848 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cam02g1282 | 892 | SUPERFAMILY | HMA, heavy metal-associated domain | 45 | 117 | IPR036163 | GO:0046872(InterPro) | |
Cam02g1282 | 892 | FunFam | Copper-transporting ATPase 1, putative | 332 | 454 | - | - | |
Cam02g1282 | 892 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 312 | 556 | IPR023298 | - | |
Cam02g1282 | 892 | SFLD | p-type atpase | 546 | 823 | IPR044492 | - | |
Cam02g1282 | 892 | Gene3D | - | 332 | 454 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1282 | Cam-Chr2:25135663 | Cam04g0458 | Cam-Chr4:17279802 | 1.40E-251 | dispersed | |
Cam01g0282 | Cam-Chr1:3139909 | Cam02g1282 | Cam-Chr2:25135663 | 8.60E-247 | transposed | |
Cam01g2617 | Cam-Chr1:37721613 | Cam02g1282 | Cam-Chr2:25135663 | 7.40E-193 | transposed | |
Cam02g0840 | Cam-Chr2:10890245 | Cam02g1282 | Cam-Chr2:25135663 | 3.10E-22 | transposed | |
Cam05g1738 | Cam-Chr5:25982904 | Cam02g1282 | Cam-Chr2:25135663 | 1.40E-89 | transposed | |
Cam10g0903 | Cam-Chr10:20131217 | Cam02g1282 | Cam-Chr2:25135663 | 9.20E-97 | transposed | |
Cam01g1806 | Cam-Chr1:31610617 | Cam02g1282 | Cam-Chr2:25135663 | 1.80E-25 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1282 | K17686 | - | csv:101214276 | 1503.03 |