Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1282 ATGGAAGCTAATATTCATGATCTTAAGGTGCCTCTAAATCCACGGGGCCTCAATAATGAAGACAGAGAAGTAGAAATCATAGAAGCCGGAGGATTCCCCGGCGACGAATTTTCAGAACAAGGCATTGCAGCAACATGTCGTCTAAGAGTTCCAAGAATAGGCTGCCCAGCCAAAGTCCGTTCTCTTCAAAAAGCCCTAGCCATGGTCCACGGCGTAAAACGAGCAACCGTAGTTCTCGAAATCGAAGAAGCCAAAGTCCTCTTCGATCCAAATTTAACCACAGAGACCCTAATCCTCACAGAAATCGACAATTCCGGCTTCGAAGCCGAGCTCATCTCCGCTGCAGACGAAGCCTACAAAGTTCACATAAAACTTAATCGAGCGAGCCCCGGAGACATGCCCGCCATCAAATCCTCTCTCGAGCAAGCTCCGGGAGTGAACTGTGTGGAAATGGAGGCGATAGGGCGGATGGTAGCCATCGACTACGACCCTGATCGGACGGGTCCAAGGTGCCTTCTGCAGTTCCTGGAGAAGTATGGAGCAAGCTTGTATGTGCCTCCGAAGAGAAGAGATGTGGAGCAGCTTCAAGAAGCTTGTGCTTATAGGAATTTGTTCTTGCTGAGCTGCTTGTTTTCTGTTCCAGTGGTGGCTTTTGCAATGGTGCTTCCAATGCTTCCTCCTTATGGAGATTGGTTGAATTTTAGGGTTTGCAGTATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACTCCAGTCCAGTTCCTTGCTGGTCGCAGATTTTATGTAGGATCATACCGTGCATTACAACGGAAATCTGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCTTACTTTTACTCAGTATACATAGTTTTTAAAGCATCCACTTCCAACTCTTTTAAGGGGAAAGATTTCTTTGAGACTAGCTCCATGTTGATCTCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAAGGCAAATCATCAGATGCTTTAGCACAGCTTGCTCATCTTGCTCCTGATACAGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGGTGGAGATTGATACCCAACTCATACAGAGGAATGACATAATTAAGATTGTTCCTGGGGCAAAAGTTCCTGTTGATGGGGTCGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACAGGAGAAGCAAGATCCATTGGCAAATCAACTGGTGATAAGGTTATTGGAGGGACTGTCAATGAAAATGGATGCTTATTTGTTAAAACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTCGTGGAATCGGCTCAGCTATCACGAGCCCCAGCTCAAAAATTAGCAGATCAGATATCAAAGTTCTTTGTTCCTGTTGTTGTTGTGGCAGCATCTGTGACATGGCTGGGATGGTTAATTTGTGGAGAACTTGGTTTATACCCCAAACATTGGATACCAAAAGGCATGGATGAGTTTGAACTTGCCCTGCAATTTGCCATTTCAGTGCTGGTGATTGCATGCCCGTGTGCCCTTGGTTTAGCAACACCGACTGCGATCATGGTTGCGTCGGGAAAAGGTGCTTCTCTAGGTGTGCTCATTAAAGGGGCAAGTGCACTTCAAAATGCATACAAGGTGAAAACAGTAGTTTTTGACAAGACTGGAACTCTGACAATTGGGAGGCCAGAGGTAGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGTGATGTAGCAATAGCAATTGAGTCAAACAGCGAACACCCTCTAGCAAAATCTGTAGTGGAGCATGCAAAGAAAATGAGAAAGAAGTTTGGGGCCCGAAGTGAATGTCGCAAACGCATCCAGAACTTCGAGGTGTTCCCGGGAGAAGGGGTTGGAGGAAGAATTGATAGAAAGACAGTTTTAGTAGGAAACAGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGGTATGTTATAGAAAACGAGCGACTGGCTCAAACATGTGTCTTGGTGGCTATTAATGGCAGGGTAGCAGGAGGTTTTGGTGTTATAGATGCGCCAAAGCCTGGGACTAAAGCTGTCATATCATTTCTTCGTTCGATTGGCATCTCAACCATAATGGTCACCGGAGATAACTGGGCCACAGCCTTCGCGGTTGCAAGAGGGGTCGGGATTAGTGAAGTCTTTGCAGAGATGGATCCAATTGGAAAAGCTAACAAGATTAGATCCTTAAAGACGTCAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAATGACTCACATGCCTTAGCTGCAGCTGATGTCGGTATTGCAATTGGTGCTGGAACAAATATTGCTATTGAAGCAGCTGATATTGTTCTAATGCGAAGCAATTTAGAAGATGTGGTTACTGCTATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATTTGGGCTCTTGGCTACAATATCATCGGCATGCCTATTGCTGCCGGAATCCTATATCCCTTCTTTGGAATCCGACTGCCACCGTGGCTTGCCGGTGCATGTATGGCTGCTTCCTCCCTTAGTGTTGTATGTTCTTCTCTCTTATTGAAATGTTATAGGAGACCCTTGAATTTTCAATCCACTTGA 2679 44.76 MEANIHDLKVPLNPRGLNNEDREVEIIEAGGFPGDEFSEQGIAATCRLRVPRIGCPAKVRSLQKALAMVHGVKRATVVLEIEEAKVLFDPNLTTETLILTEIDNSGFEAELISAADEAYKVHIKLNRASPGDMPAIKSSLEQAPGVNCVEMEAIGRMVAIDYDPDRTGPRCLLQFLEKYGASLYVPPKRRDVEQLQEACAYRNLFLLSCLFSVPVVAFAMVLPMLPPYGDWLNFRVCSMLTVGMVLKWIFCTPVQFLAGRRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFKGKDFFETSSMLISFILLGKYLEVMAKGKSSDALAQLAHLAPDTACLMTFDDHGNLLSEVEIDTQLIQRNDIIKIVPGAKVPVDGVVISGESNVNESTITGEARSIGKSTGDKVIGGTVNENGCLFVKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADQISKFFVPVVVVAASVTWLGWLICGELGLYPKHWIPKGMDEFELALQFAISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKTVVFDKTGTLTIGRPEVVSVVLFSTFPMQELCDVAIAIESNSEHPLAKSVVEHAKKMRKKFGARSECRKRIQNFEVFPGEGVGGRIDRKTVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCVLVAINGRVAGGFGVIDAPKPGTKAVISFLRSIGISTIMVTGDNWATAFAVARGVGISEVFAEMDPIGKANKIRSLKTSGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFFGIRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLNFQST 892
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25135663 25146612 + CaPI482276_02g012820.1 Cam02g1282 121024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1282 892 ProSiteProfiles Heavy-metal-associated domain profile. 44 110 IPR006121 GO:0046872(InterPro)
Cam02g1282 892 CDD HMA 48 110 IPR006121 GO:0046872(InterPro)
Cam02g1282 892 Gene3D - 43 117 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 718 728 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 564 578 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 794 806 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 696 707 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 771 790 - -
Cam02g1282 892 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Cam02g1282 892 Pfam E1-E2 ATPase 363 542 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase 1 signature 45 70 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase 1 signature 240 260 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase 1 signature 71 94 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase 1 signature 205 226 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase 1 signature 260 285 - -
Cam02g1282 892 FunFam Probable copper-transporting ATPase HMA5 696 828 - -
Cam02g1282 892 NCBIfam heavy metal translocating P-type ATPase 277 880 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cam02g1282 892 SUPERFAMILY Calcium ATPase, transduction domain A 364 450 IPR008250 -
Cam02g1282 892 SFLD Haloacid Dehalogenase 546 823 - -
Cam02g1282 892 Pfam haloacid dehalogenase-like hydrolase 560 785 - -
Cam02g1282 892 SUPERFAMILY HAD-like 562 877 IPR036412 -
Cam02g1282 892 ProSitePatterns E1-E2 ATPases phosphorylation site. 566 572 IPR018303 -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 262 281 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 314 333 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 844 858 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 473 487 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 748 765 - -
Cam02g1282 892 PRINTS Copper-transporting ATPase signature 334 352 - -
Cam02g1282 892 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 18 888 - -
Cam02g1282 892 Gene3D - 651 702 IPR023299 GO:0000166(InterPro)
Cam02g1282 892 Gene3D - 571 650 IPR023299 GO:0000166(InterPro)
Cam02g1282 892 CDD P-type_ATPase_Cu-like 205 867 - -
Cam02g1282 892 Gene3D - 531 827 IPR023214 -
Cam02g1282 892 NCBIfam HAD-IC family P-type ATPase 317 848 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam02g1282 892 SUPERFAMILY HMA, heavy metal-associated domain 45 117 IPR036163 GO:0046872(InterPro)
Cam02g1282 892 FunFam Copper-transporting ATPase 1, putative 332 454 - -
Cam02g1282 892 SUPERFAMILY Calcium ATPase, transmembrane domain M 312 556 IPR023298 -
Cam02g1282 892 SFLD p-type atpase 546 823 IPR044492 -
Cam02g1282 892 Gene3D - 332 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1282 Cam-Chr2:25135663 Cam04g0458 Cam-Chr4:17279802 1.40E-251 dispersed
Cam01g0282 Cam-Chr1:3139909 Cam02g1282 Cam-Chr2:25135663 8.60E-247 transposed
Cam01g2617 Cam-Chr1:37721613 Cam02g1282 Cam-Chr2:25135663 7.40E-193 transposed
Cam02g0840 Cam-Chr2:10890245 Cam02g1282 Cam-Chr2:25135663 3.10E-22 transposed
Cam05g1738 Cam-Chr5:25982904 Cam02g1282 Cam-Chr2:25135663 1.40E-89 transposed
Cam10g0903 Cam-Chr10:20131217 Cam02g1282 Cam-Chr2:25135663 9.20E-97 transposed
Cam01g1806 Cam-Chr1:31610617 Cam02g1282 Cam-Chr2:25135663 1.80E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1282 K17686 - csv:101214276 1503.03