Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1314 ATGGATACCTTGTTCAGGTTGGTCAATGATCTTGAATCCTCTAATCAACATTCTTACAACAATTCTAGCAGCAGCTCAAAGAATTGTAGTGATCAAAATCATTATTACCATCTTCAAAAGCCACAATCTGAAGAATGCTTCAACAATTTGTTCATGGAGGAAGAAGACCATTTCTCTGCATCCTCTTCTTTAGATCATAATCATCACCACCAACTCCCACAGTTTCAATGTTCTACCACCGGGACTAATACTACATCCACCGGTACTACAGCTCCAAGGGATGAGTGGTTCTCTTCCTTCACCCAAGAGTTGAACTTTGAATTCTCTGATGATTGGGCATCCACGATACTCCTCCAAACAGCCATCGCCATTGTCGACAACAACACCAGTCGAATCCAACAACTCATGTGGATGTTGAATGAGCTCGGTTCTCCATATGGGGACATTGATCAAAAGTTAGCATTCTACTTCCTTCAAGGCATGTTTAGTCGCGTCACCGACTCCGGTGCCAAGTGGTACGGGACGTTGGTAGCGGCGTCGGAGAAACGGTCGTGTTTCGAGTCGATGAGAAGAATGGTGCTGAAGTTTGAGGAGGTGAGTCCATGGATGACATTTGGTCATGTTGCTTCAAATGGTTGGATTATGGAAGCTTTACAAGGTGAAAAGAAGTTGCATATAATTGATATGGCCGGAAACTCCTCATTTTGCACTCAATGGCCCACTTTTATTGAAGCTCTCGCAACACAATCGGACCAGACTCCGCACCTTACCCTCACATTGTTGGTTGCAGCCAAATCCGACGGAACCATACGAGCCCATAAGAAATTGGTGAAAGAAATAAGTAGAAGACTAGAGAAATTCGCAAGGCTTATGGGAGTTTCCTTCAAATTCAAACCCATTTTCCACTACGGCGACGTTTCACAGTTTGATTTTACACACTTAGGCATCAAACACGACGAGGCCCTCGCCGTCAACTGTGCCGGCGCCTTGCGCTCCGTCGCCCCCCTCCACAACCGCCGCGATTTTCTCATATCCCTGTTCCGATCTTTGCGTCCCAGGATTATCACCGTCGTAGAGGAGGAGGCCGATCTCGATCCCCACAGCGGCGTTGACTTTGTCAAACACATTCAGGAGTGTTTACGCTGGTTTAGGCTTTACTTTGATTCGTTGGACGGAAGTTTCCCGACCGCCACCGACGAGCAGTTCATGCTTGAACGCGCCGCCGGACGCGCCGTTGTGGATTTGCTTGCACGCGTGCCGGCGGAGTCGGTGGAGAGGCGCGAGACCGCCGCGCGTTGGGCGCGTCGTTTGTATGACGGTGGCTTTAAACCGGTGTCGTTTAGCGAGGATGTAAATGACGATGTACGCGCGCTAGTGAGGAGGTACAAGGATGGGTGGACGATGACGGACGGGGATGGCTCCGGTGCCGGAATATTTTTGGCTTGGAAGGGGCAGCCGGTTGTTTGGGCCTCCGCGTGGGCTCCTGTAGAGCTAGACGGAGAGAAGACACATGTGTGA 1518 49.6 MDTLFRLVNDLESSNQHSYNNSSSSSKNCSDQNHYYHLQKPQSEECFNNLFMEEEDHFSASSSLDHNHHHQLPQFQCSTTGTNTTSTGTTAPRDEWFSSFTQELNFEFSDDWASTILLQTAIAIVDNNTSRIQQLMWMLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKWYGTLVAASEKRSCFESMRRMVLKFEEVSPWMTFGHVASNGWIMEALQGEKKLHIIDMAGNSSFCTQWPTFIEALATQSDQTPHLTLTLLVAAKSDGTIRAHKKLVKEISRRLEKFARLMGVSFKFKPIFHYGDVSQFDFTHLGIKHDEALAVNCAGALRSVAPLHNRRDFLISLFRSLRPRIITVVEEEADLDPHSGVDFVKHIQECLRWFRLYFDSLDGSFPTATDEQFMLERAAGRAVVDLLARVPAESVERRETAARWARRLYDGGFKPVSFSEDVNDDVRALVRRYKDGWTMTDGDGSGAGIFLAWKGQPVVWASAWAPVELDGEKTHV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25588732 25592216 - CaPI482276_02g013140.1 Cam02g1314 121056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1314 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 493 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
Cam02g1314 505 ProSiteProfiles GRAS family profile. 104 494 IPR005202 -
Cam02g1314 505 Pfam GRAS domain family 115 493 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1800 Cam-Chr1:31566104 Cam02g1314 Cam-Chr2:25588732 5.30E-144 dispersed
Cam02g1314 Cam-Chr2:25588732 Cam06g0126 Cam-Chr6:3221289 2.40E-99 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51499 PF03514 GRAS 1.30E-87 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1314 K27743 - csv:101210294 803.897