Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1420 ATGAGAGCTTCAAATCCCTATTTTCTCATCTGGATTCTTTGTGCTTTGTGTTTATCATCATCTCTCTCATCAGAATTCACTCCCGATGATAATTTTCTGATCGATTGTGGATCATCCTCCAATAGTACAGTGGAAGGTCGTTTATTTCTATCTGATGATTCCAACCCAAATGGGAAATCTCTTTCCACTACAAGCAATGTATCTAGTTCATCTCCATTAGACTTGTTCTCACCTCTATTTAGAACTGCAAAAGTATTTGAAACAACTTCCCAATACAACTTCAAAATTAAGAAACAGGGCAGGCACTGGATCCGCCTATATTTTTACCCTTTTGTTTCTGGGAACTTCAGCTTGAGTTTAGCCAAATTCTCAGTTTCTGCTCAAAATATCACCCTTCTCAAAGAGTTTCAAATCGACAGTGGCTCGGTAATCAAGGAATATTCTTTGAATGTCACTTCCAGTAATCTTGTTCTTACATTTACTCCCATGGTGAATTCATTTGCCTTCATCAATGCCTTGGAAGTTGTTTCTGTTCCTAATGAACTGATTCCCTCGACTATCACCAGTGTTGAGAAGATCAAAATTAGTTTGGAGAACAGGGTATTGGAGACAGTTGCTAGAGTGAATATGGGCAATGAAACCGTGTTGCCGAATGACGATATTCTCTCACGCCTTTGGGTTGCAGATGGTCCATTCTTGATGCATAATGATCAGGTTGTTGTCGGAAAGTTTGTGTCAAATCTCACAAAAGTGAATATGACAAGAGGTTCTGAAATTAAGGCTCCTCGTTTTGTGTATGGAACAGCAACTCAGTTAGGAGCTGATGTGGATGCGAATGCTAATGTCAATGTATCGTGGTCATTCGACATTGATCTGGGATATGAATATCTGATTCGTTATCATTTCTGTGATATTATTGATCTTTTTCTTGGACCAATTTCATTCAATGTTTATGTTAACTCGTGGAAGGTTAAAGATCATCTTGATCTTAGCAGTCTCACTTCACATGTCCCAGGTGCACCCTATGTCCTGGACACTATAGCCAGTCCAATTGACAGCTCTAAGTTCAAAATAAGTGTTGGCCCTTCCAATTTTCATGAGTATTCAGCTGCCATTCTAAACGGGCTCGAGATCATGAAAATTAGTGATTCTCGGAGGAGCCTCGATGAACCCTCTGGTTTACACTCAAAGAAAGGTTCCAATGTTAAAGTTGGTCTTATAGCAGGCTTGGTAGCTGGACTGCTTGTTCTTGTTGTTTTGGCCACTCTTGTCATTGTGCTGTGCAGAAGAAGGAGATCCGCGCTTGTTCGTCACTTGAAGGAAGAGGAAAATTTTGGTGCGAATGGTAGAGAAAGCAACTACATCATTGGATCTGTTGCCTTTTCGAACTCAAAAATCAGTTATCGATATCCTCTTGCAGCTATTCAGGAAGCTACAGGTCATTTTAGTGAAAGTTTAGTCATTGGCCTTGGTGGGTTTGGGAAAGTTTACAAGGGGATGTTGAGGGACAACACAGAAGTGGCAGTGAAAAGAGGAACTTCTAAATCCCAGCAGGGTCTTGCAGAGTTTCAAACTGAAATTGAGATGTTATCCCAGTTTCGCCACCGTCATTTAGTTTCTCTGATTGGGTACTGCGACGAGCAAAACGAGATGATTATAATTTATGAGTACATGGAAAAAGGGACCCTCAAGGACCATTTGTATGGATCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGATATTTGCATTGGCTCAGCTAGAGGACTTCATTATCTTCACACTGGCTCCACAAAGGCAATCATACACAGAGATGTCAAAACTGCAAACATTCTTCTTGATCAAAACTACATGGCCAAAGTTGCGGACTTCGGACTCTCGAAGATTGGCCCCGAATTCGACAAGACTCATGTCAGTACAGCAGTGAAAGGAAGCTTCGGCTATCTCGATCCCGAGTATTTAACGACGCAGCAACTGACCGAGAAATCAGACGTGTACTCTTTTGGGGTGGTTATGTTTGAAGTCCTTTGTGGTAGGCCTGTCATTGATCCATCTCTTCCAAGGGAAAAAGTGAATTTAATTGAATGGGTAATGAGGAGGAAGGACAGAGATCAACTGGAGGGGATAGTAGACGCTCGCATTGTCGAGCAAATCAAGCTAGAATCTCTGAAAAAATATGTAGAGACGGCCGAGAAATGCTTGGCAGAATGTGGAATGGATCGTCCGACGATGGGAAACGTTCTATGGAATCTGGAGTGTGCTCTCCAGCTCCAAGGGGACGAAAAATCTCGTCATGGAAAGGAATCATCCTCACAAGCTGATCTTTCCAACCACTGGGAGGCGAGCGTATCAACGACTCAATTCAGCACGGGAAGTGCGGTCGATATCGCGGGTATTTCGATGAGTAAGGTATTTGCTCAAATGGTGAGGGAAGATATGAGATAG 2448 42.08 MRASNPYFLIWILCALCLSSSLSSEFTPDDNFLIDCGSSSNSTVEGRLFLSDDSNPNGKSLSTTSNVSSSSPLDLFSPLFRTAKVFETTSQYNFKIKKQGRHWIRLYFYPFVSGNFSLSLAKFSVSAQNITLLKEFQIDSGSVIKEYSLNVTSSNLVLTFTPMVNSFAFINALEVVSVPNELIPSTITSVEKIKISLENRVLETVARVNMGNETVLPNDDILSRLWVADGPFLMHNDQVVVGKFVSNLTKVNMTRGSEIKAPRFVYGTATQLGADVDANANVNVSWSFDIDLGYEYLIRYHFCDIIDLFLGPISFNVYVNSWKVKDHLDLSSLTSHVPGAPYVLDTIASPIDSSKFKISVGPSNFHEYSAAILNGLEIMKISDSRRSLDEPSGLHSKKGSNVKVGLIAGLVAGLLVLVVLATLVIVLCRRRRSALVRHLKEEENFGANGRESNYIIGSVAFSNSKISYRYPLAAIQEATGHFSESLVIGLGGFGKVYKGMLRDNTEVAVKRGTSKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGTLKDHLYGSELPSLSWKQRLDICIGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKIGPEFDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMRRKDRDQLEGIVDARIVEQIKLESLKKYVETAEKCLAECGMDRPTMGNVLWNLECALQLQGDEKSRHGKESSSQADLSNHWEASVSTTQFSTGSAVDIAGISMSKVFAQMVREDMR 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26967970 26970417 + CaPI482276_02g014200.1 Cam02g1420 121162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1420 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1420 815 SMART serkin_6 482 755 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1420 815 FunFam Receptor-like protein kinase FERONIA 558 772 - -
Cam02g1420 815 ProSiteProfiles Protein kinase domain profile. 482 756 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1420 815 PANTHER OS07G0166700 PROTEIN 470 759 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cam02g1420 815 CDD STKc_IRAK 488 753 - -
Cam02g1420 815 Pfam Protein tyrosine and serine/threonine kinase 487 698 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1420 815 SUPERFAMILY Protein kinase-like (PK-like) 464 752 IPR011009 -
Cam02g1420 815 Gene3D - 31 179 - -
Cam02g1420 815 Gene3D - 201 382 - -
Cam02g1420 815 Gene3D Transferase(Phosphotransferase) domain 1 558 780 - -
Cam02g1420 815 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524(InterPro)
Cam02g1420 815 FunFam receptor-like protein kinase FERONIA 448 557 - -
Cam02g1420 815 FunFam Putative receptor-like protein kinase 31 179 - -
Cam02g1420 815 Pfam Malectin-like domain 34 381 IPR024788 -
Cam02g1420 815 Gene3D Phosphorylase Kinase; domain 1 448 557 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1420 Cam-Chr2:26967970 Cam02g2129 Cam-Chr2:34044896 2.90E-211 dispersed
Cam02g1420 Cam-Chr2:26967970 Cam11g1862 Cam-Chr11:31189357 1.50E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84968 PF12819 Malectin_like 4.90E-31 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1420 - - - 0.0