Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1427 ATGAGCAGAATTAGCCTACAATGGCGGAAAAGAAAAGGAAGAAACCCTGAGGAGGAGGAGGGCCAATTAAACTTAAAAGGGCCTGCAAGATCTCTGGCAATCTGCGCTCAAGTTCCTACGTATAGCCATCAAGAAACTCAATGTTTTCTCATTCAAGCATTAATGGTTGCTGCTTTGATCAATGGTTTTCTGACATCTGAAACTTGCGAAAATTCCAGTAGAGGTGGGGATGCAAGTGGTCGGGTTGACGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGGGAATTCTCAATGGCAGTTATTCAGGCAAATAATTTGTTGGAAGATCGTAGCCAACTTGAGTCAGGACCACTGAGCTCATTTGAATCGGGTCCCGTTGGAACGTTTGTTGGAATTTATGATGGCCATGGAGGACCAGAAGCTGCAGAATTCATAAATGATCGTCTTTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGAAAATCGGGGGGTATCTGCTGAAATTATTAATAAAGCATTCTTGGAGACGGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTATGAAGCCTCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGGAGATTTGAAAAAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGAGAGAGGAGCTGCACTCGTTGCATCCCAATGATCCACAGATTGTGGTGCTAAAGCACAAGGTGTGGCGCGTGAAGGGCGTTATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCAAGAGCCTCTTTTGCCGAAGTTCAGACTACCAGAACCATTCCACAAGCCAATACTTAAAGCCGAGCCTGCTATTGTAGTGCAGAAACTGTACCCAGAGGATCAGTTTCTTATATTTGCTTCAGATGGTCTTTGGGAGTATATAAGCAATCAGGAAGCTGTCGACATCGTCCATAGTTGTCCACGTAACGGGGTTGCTAGGAAACTCGTTAAAGCCGCTCTTCATGAAGCTGCAAAGAAAAGAGAAATGAGATATACAGACTTGAAGAAGATTGACCGCGGGGTAAGAAGGCATTTTCACGACGACATCACTGTTATAGTTTTGTTCCTCGATTCACATCTGATTAGTCGCAGTCCAAGCTACGGACCAATGCTTTCAATCAGAGGAGGTTCTGGTATCCTCGCTAGATCATAG 1317 43.2 MSRISLQWRKRKGRNPEEEEGQLNLKGPARSLAICAQVPTYSHQETQCFLIQALMVAALINGFLTSETCENSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSFESGPVGTFVGIYDGHGGPEAAEFINDRLFNNMKTFHGAEFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLMKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFEKTHKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNQEPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRNGVARKLVKAALHEAAKKREMRYTDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGGSGILARS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27038249 27042747 + CaPI482276_02g014270.1 Cam02g1427 121169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1427 438 FunFam Phosphatase 2C family protein 87 421 - -
Cam02g1427 438 Pfam Protein phosphatase 2C 131 380 IPR001932 -
Cam02g1427 438 Gene3D - 86 419 IPR036457 -
Cam02g1427 438 MobiDBLite consensus disorder prediction 1 23 - -
Cam02g1427 438 ProSiteProfiles PPM-type phosphatase domain profile. 98 411 IPR001932 -
Cam02g1427 438 PANTHER PROTEIN PHOSPHATASE 91 410 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g1427 438 CDD PP2Cc 99 411 IPR001932 -
Cam02g1427 438 SUPERFAMILY PP2C-like 107 412 IPR036457 -
Cam02g1427 438 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169(InterPro)
Cam02g1427 438 SMART PP2C_4 90 409 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1427 Cam-Chr2:27038249 Cam10g0048 Cam-Chr10:2101953 4.00E-135 dispersed
Cam10g2036 Cam-Chr10:34200090 Cam02g1427 Cam-Chr2:27038249 5.40E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1427 K01102 - csv:101220760 716.072